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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Bifidobacterium longum (GCA_900104835.1)

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PROKKA Annotations for GCA_900104835.1
Genome Selected: Bifidobacterium longum
ContigsBases CDSrRNA tmRNAtRNA
6 2449019 2005 8 1 77
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Sort Column:   Molecule   PID   NA   AA   Gene  Gene Product  Reverse
Annotation Table [page:5]    |    Number of Records Found: 2104 [5 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2001 FNRW01000001.1 GCA_900104835.1_02001 CDS open 312763-313986 1224_na     407_aa murB UDP-N-acetylenolpyruvoylglucosamine reductase
2002 FNRW01000001.1 GCA_900104835.1_02002 CDS open 314260-314427 168_na     55_aa rpmG2 50S ribosomal protein L33 2
2003 FNRW01000001.1 tRNA open 314488-314562 tRNA-Met(cat)
2004 FNRW01000001.1 tRNA open 314566-314638 tRNA-Thr(ggt)
2005 FNRW01000001.1 tRNA open 314639-314721 tRNA-Tyr(gta)
2006 FNRW01000001.1 GCA_900104835.1_02006 CDS open 315030-315422 393_na     130_aa metZ O-succinylhomoserine sulfhydrylase
2007 FNRW01000001.1 GCA_900104835.1_02007 CDS open 316254-316547 294_na     97_aa groS 10 kDa chaperonin
2008 FNRW01000001.1 GCA_900104835.1_02008 CDS open 316720-318144 1425_na     474_aa hypothetical protein
2009 FNRW01000001.1 GCA_900104835.1_02009 CDS open 318225-318890 666_na     221_aa hypothetical protein
2010 FNRW01000001.1 GCA_900104835.1_02010 CDS open 318956-319696 741_na     246_aa 5-formyltetrahydrofolate cyclo-ligase
2011 FNRW01000001.1 GCA_900104835.1_02011 CDS open 319860-320045 186_na     61_aa hypothetical protein
2012 FNRW01000001.1 GCA_900104835.1_02012 CDS open 320226-320852 627_na     208_aa hypothetical protein
2013 FNRW01000001.1 GCA_900104835.1_02013 CDS open 320947-321147 201_na     66_aa hypothetical protein
2014 FNRW01000001.1 GCA_900104835.1_02014 CDS open 321150-324773 3624_na     1207_aa hypothetical protein
2015 FNRW01000001.1 GCA_900104835.1_02015 CDS open 324782-326275 1494_na     497_aa hypothetical protein
2016 FNRW01000001.1 GCA_900104835.1_02016 CDS open 326527-326907 381_na     126_aa rplL 50S ribosomal protein L7L12
2017 FNRW01000001.1 GCA_900104835.1_02017 CDS open 327016-327537 522_na     173_aa rplJ 50S ribosomal protein L10
2018 FNRW01000001.1 GCA_900104835.1_02018 CDS open 327806-328636 831_na     276_aa hypothetical protein
2019 FNRW01000001.1 GCA_900104835.1_02019 CDS open 328892-330286 1395_na     464_aa pbuO Guaninehypoxanthine permease PbuO
2020 FNRW01000001.1 GCA_900104835.1_02020 CDS open 330712-333453 2742_na     913_aa pnp Polyribonucleotide nucleotidyltransferase
2021 FNRW01000001.1 GCA_900104835.1_02021 CDS open 333729-333998 270_na     89_aa rpsO 30S ribosomal protein S15
2022 FNRW01000001.1 GCA_900104835.1_02022 CDS open 334167-334850 684_na     227_aa hypothetical protein
2023 FNRW01000001.1 GCA_900104835.1_02023 CDS open 335376-338081 2706_na     901_aa hypothetical protein
2024 FNRW01000001.1 GCA_900104835.1_02024 CDS open 338475-341027 2553_na     850_aa hypothetical protein
2025 FNRW01000001.1 GCA_900104835.1_02025 CDS open 341646-342752 1107_na     368_aa IS30 family transposase ISBlo7
2026 FNRW01000001.1 GCA_900104835.1_02026 CDS open 342836-343864 1029_na     342_aa btuD_13 Vitamin B12 import ATP-binding protein BtuD
2027 FNRW01000001.1 GCA_900104835.1_02027 CDS open 344030-344488 459_na     152_aa IS30 family transposase ISBlo7
2028 FNRW01000001.1 GCA_900104835.1_02028 CDS open 344569-345255 687_na     228_aa hypothetical protein
2029 FNRW01000001.1 GCA_900104835.1_02029 CDS open 345556-346068 513_na     170_aa hypothetical protein
2030 FNRW01000001.1 GCA_900104835.1_02030 CDS open 346530-347774 1245_na     414_aa hypothetical protein
2031 FNRW01000001.1 GCA_900104835.1_02031 CDS open 347971-350421 2451_na     816_aa hypothetical protein
2032 FNRW01000001.1 tRNA open 350875-350948 tRNA-Gly(tcc)
2033 FNRW01000001.1 GCA_900104835.1_02033 CDS open 351127-353178 2052_na     683_aa ams Amylosucrase
2034 FNRW01000001.1 GCA_900104835.1_02034 CDS open 353291-353839 549_na     182_aa hypothetical protein
2035 FNRW01000001.1 GCA_900104835.1_02035 CDS open 354153-354806 654_na     217_aa purR_4 HTH-type transcriptional repressor PurR
2036 FNRW01000001.1 GCA_900104835.1_02036 CDS open 355067-364585 9519_na     3172_aa hypothetical protein
2037 FNRW01000001.1 GCA_900104835.1_02037 CDS open 364624-366246 1623_na     540_aa accD5 putative propionyl-CoA carboxylase beta chain 5
2038 FNRW01000001.1 GCA_900104835.1_02038 CDS open 366239-368203 1965_na     654_aa purK_2 N5-carboxyaminoimidazole ribonucleotide synthase
2039 FNRW01000001.1 GCA_900104835.1_02039 CDS open 368716-369315 600_na     199_aa hypothetical protein
2040 FNRW01000001.1 GCA_900104835.1_02040 CDS open 369347-370252 906_na     301_aa birA Bifunctional ligaserepressor BirA
2041 FNRW01000001.1 GCA_900104835.1_02041 CDS open 370485-372509 2025_na     674_aa hypothetical protein
2042 FNRW01000001.1 GCA_900104835.1_02042 CDS open 372515-373375 861_na     286_aa hypothetical protein
2043 FNRW01000001.1 GCA_900104835.1_02043 CDS open 373482-374234 753_na     250_aa xynR_1 HTH-type transcriptional regulator XynR
2044 FNRW01000001.1 GCA_900104835.1_02044 CDS open 374278-375111 834_na     277_aa xynR_2 HTH-type transcriptional regulator XynR
2045 FNRW01000001.1 rRNA open 375688-378733 23S ribosomal RNA
2046 FNRW01000001.1 rRNA open 379174-380695 16S ribosomal RNA
2047 FNRW01000001.1 GCA_900104835.1_02047 CDS open 381272-381964 693_na     230_aa rplA 50S ribosomal protein L1
2048 FNRW01000001.1 GCA_900104835.1_02048 CDS open 381980-382411 432_na     143_aa rplK 50S ribosomal protein L11
2049 FNRW01000001.1 GCA_900104835.1_02049 CDS open 382674-383567 894_na     297_aa nusG Transcription terminationantitermination protein NusG
2050 FNRW01000001.1 GCA_900104835.1_02050 CDS open 383597-383824 228_na     75_aa hypothetical protein
2051 FNRW01000001.1 tRNA open 383862-383937 tRNA-Trp(cca)
2052 FNRW01000001.1 GCA_900104835.1_02052 CDS open 384068-385273 1206_na     401_aa aspC1 Aspartate aminotransferase
2053 FNRW01000001.1 GCA_900104835.1_02053 CDS open 385364-386497 1134_na     377_aa proB Glutamate 5-kinase
2054 FNRW01000001.1 GCA_900104835.1_02054 CDS open 386498-388189 1692_na     563_aa obg GTPase Obg
2055 FNRW01000001.1 GCA_900104835.1_02055 CDS open 388258-388506 249_na     82_aa rpmA 50S ribosomal protein L27
2056 FNRW01000001.1 GCA_900104835.1_02056 CDS open 388529-388837 309_na     102_aa rplU 50S ribosomal protein L21
2057 FNRW01000001.1 GCA_900104835.1_02057 CDS open 388989-392057 3069_na     1022_aa rne Ribonuclease E
2058 FNRW01000001.1 GCA_900104835.1_02058 CDS open 392370-393644 1275_na     424_aa dapE_2 Putative succinyl-diaminopimelate desuccinylase DapE
2059 FNRW01000001.1 GCA_900104835.1_02059 CDS open 393682-394626 945_na     314_aa hypothetical protein
2060 FNRW01000001.1 GCA_900104835.1_02060 CDS open 394802-396250 1449_na     482_aa hypothetical protein
2061 FNRW01000001.1 GCA_900104835.1_02061 CDS open 396247-397320 1074_na     357_aa btuD_14 Vitamin B12 import ATP-binding protein BtuD
2062 FNRW01000001.1 GCA_900104835.1_02062 CDS open 397516-398964 1449_na     482_aa dTTPUTP pyrophosphatase
2063 FNRW01000001.1 GCA_900104835.1_02063 CDS open 399101-400213 1113_na     370_aa thrB Homoserine kinase
2064 FNRW01000001.1 GCA_900104835.1_02064 CDS open 400308-401624 1317_na     438_aa hom Homoserine dehydrogenase
2065 FNRW01000001.1 GCA_900104835.1_02065 CDS open 401785-403377 1593_na     530_aa lysA Diaminopimelate decarboxylase
2066 FNRW01000001.1 GCA_900104835.1_02066 CDS open 403380-405242 1863_na     620_aa argS Arginine--tRNA ligase
2067 FNRW01000001.1 GCA_900104835.1_02067 CDS open 405456-406121 666_na     221_aa hypothetical protein
2068 FNRW01000001.1 GCA_900104835.1_02068 CDS open 406118-407395 1278_na     425_aa hypothetical protein
2069 FNRW01000001.1 GCA_900104835.1_02069 CDS open 407482-408414 933_na     310_aa hypothetical protein
2070 FNRW01000001.1 GCA_900104835.1_02070 CDS open 408508-409761 1254_na     417_aa metC_2 Cystathionine beta-lyase
2071 FNRW01000001.1 GCA_900104835.1_02071 CDS open 409810-411135 1326_na     441_aa murAA UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1
2072 FNRW01000001.1 GCA_900104835.1_02072 CDS open 411385-412731 1347_na     448_aa nox NADH oxidase
2073 FNRW01000001.1 GCA_900104835.1_02073 CDS open 412941-414056 1116_na     371_aa pyrD_3 Dihydroorotate dehydrogenase
2074 FNRW01000001.1 GCA_900104835.1_02074 CDS open 414539-415231 693_na     230_aa leuD 3-isopropylmalate dehydratase small subunit
2075 FNRW01000001.1 GCA_900104835.1_02075 CDS open 415314-416717 1404_na     467_aa leuC 3-isopropylmalate dehydratase large subunit
2076 FNRW01000001.1 GCA_900104835.1_02076 CDS open 417011-417811 801_na     266_aa hypothetical protein
2077 FNRW01000001.1 GCA_900104835.1_02077 CDS open 417978-419243 1266_na     421_aa hypothetical protein
2078 FNRW01000001.1 GCA_900104835.1_02078 CDS open 419748-421985 2238_na     745_aa ppk Polyphosphate kinase
2079 FNRW01000001.1 GCA_900104835.1_02079 CDS open 422143-423342 1200_na     399_aa hypothetical protein
2080 FNRW01000001.1 GCA_900104835.1_02080 CDS open 423479-424153 675_na     224_aa hypothetical protein
2081 FNRW01000001.1 GCA_900104835.1_02081 CDS open 424412-425722 1311_na     436_aa hypothetical protein
2082 FNRW01000001.1 GCA_900104835.1_02082 CDS open 426026-426667 642_na     213_aa upp Uracil phosphoribosyltransferase
2083 FNRW01000001.1 GCA_900104835.1_02083 CDS open 426715-427194 480_na     159_aa rlmH Ribosomal RNA large subunit methyltransferase H
2084 FNRW01000001.1 GCA_900104835.1_02084 CDS open 427390-428499 1110_na     369_aa hypothetical protein
2085 FNRW01000001.1 GCA_900104835.1_02085 CDS open 428525-429634 1110_na     369_aa gluQ Glutamyl-Q tRNA(Asp) synthetase
2086 FNRW01000001.1 GCA_900104835.1_02086 CDS open 429781-432450 2670_na     889_aa clpB Chaperone protein ClpB
2087 FNRW01000001.1 GCA_900104835.1_02087 CDS open 432669-434222 1554_na     517_aa hutH Histidine ammonia-lyase
2088 FNRW01000001.1 GCA_900104835.1_02088 CDS open 434468-435343 876_na     291_aa hypothetical protein
2089 FNRW01000001.1 GCA_900104835.1_02089 CDS open 435340-435516 177_na     58_aa hypothetical protein
2090 FNRW01000001.1 GCA_900104835.1_02090 CDS open 435574-436395 822_na     273_aa hypothetical protein
2091 FNRW01000001.1 GCA_900104835.1_02091 CDS open 436498-437706 1209_na     402_aa hypothetical protein
2092 FNRW01000001.1 GCA_900104835.1_02092 CDS open 437974-439518 1545_na     514_aa hypothetical protein
2093 FNRW01000001.1 GCA_900104835.1_02093 CDS open 439751-440962 1212_na     403_aa glf UDP-galactopyranose mutase
2094 FNRW01000001.1 GCA_900104835.1_02094 CDS open 441037-441171 135_na     44_aa hypothetical protein
2095 FNRW01000001.1 GCA_900104835.1_02095 CDS open 441229-442260 1032_na     343_aa glyG_3 Glycosyltransferase GlyG
2096 FNRW01000001.1 GCA_900104835.1_02096 CDS open 442444-442908 465_na     154_aa hypothetical protein
2097 FNRW01000001.1 GCA_900104835.1_02097 CDS open 442941-443576 636_na     211_aa hypothetical protein
2098 FNRW01000001.1 GCA_900104835.1_02098 CDS open 443529-445115 1587_na     528_aa hypothetical protein
2099 FNRW01000001.1 GCA_900104835.1_02099 CDS open 445212-446207 996_na     331_aa hypothetical protein
2100 FNRW01000001.1 GCA_900104835.1_02100 CDS open 446200-447450 1251_na     416_aa hypothetical protein
2101 FNRW01000001.1 GCA_900104835.1_02101 CDS open 447447-448343 897_na     298_aa hypothetical protein
2102 FNRW01000001.1 GCA_900104835.1_02102 CDS open 448536-449363 828_na     275_aa hypothetical protein
2103 FNRW01000001.1 GCA_900104835.1_02103 CDS open 449363-450637 1275_na     424_aa btuD_15 Vitamin B12 import ATP-binding protein BtuD
2104 FNRW01000001.1 GCA_900104835.1_02104 CDS open 450637-451557 921_na     306_aa hypothetical protein