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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Bordetella pertussis (GCA_900445785.1)

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PROKKA Annotations for GCA_900445785.1
Genome Selected: Bordetella pertussis
ContigsBases CDSrRNA tmRNAtRNA
2 4,775,492 4509 9 1 66
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Annotation Table [page:10]    |    Number of Records Found: 4603 [10 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  6  7  8  9  10  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
4501 UFUC01000001.1 GCA_900445785.1_04501 CDS open 3940111-3940746 636_na     211_aa aroK Shikimate kinase
4502 UFUC01000001.1 GCA_900445785.1_04502 CDS open 3940833-3943304 2472_na     823_aa mrcA_2 Penicillin-binding protein 1A
4503 UFUC01000001.1 GCA_900445785.1_04503 CDS open 3943361-3943690 330_na     109_aa cyaY Iron-sulfur cluster assembly protein CyaY
4504 UFUC01000001.1 GCA_900445785.1_04504 CDS open 3943710-3943907 198_na     65_aa hypothetical protein
4505 UFUC01000001.1 GCA_900445785.1_04505 CDS open 3943904-3945193 1290_na     429_aa lysA Diaminopimelate decarboxylase
4506 UFUC01000001.1 GCA_900445785.1_04506 CDS open 3945264-3946598 1335_na     444_aa ccsA Cytochrome c biogenesis protein CcsA
4507 UFUC01000001.1 GCA_900445785.1_04507 CDS open 3946608-3948704 2097_na     698_aa ccs1 Cytochrome c biogenesis protein Ccs1
4508 UFUC01000001.1 GCA_900445785.1_04508 CDS open 3948822-3949523 702_na     233_aa cc4 Cytochrome c4
4509 UFUC01000001.1 GCA_900445785.1_04509 CDS open 3949747-3950370 624_na     207_aa engB putative GTP-binding protein EngB
4510 UFUC01000001.1 GCA_900445785.1_04510 CDS open 3950367-3951383 1017_na     338_aa hemB Delta-aminolevulinic acid dehydratase
4511 UFUC01000001.1 GCA_900445785.1_04511 CDS open 3951380-3952336 957_na     318_aa eamA_3 putative amino-acid metabolite efflux pump
4512 UFUC01000001.1 GCA_900445785.1_04512 CDS open 3952458-3954392 1935_na     644_aa dsbD Thiol:disulfide interchange protein DsbD
4513 UFUC01000001.1 GCA_900445785.1_04513 CDS open 3954406-3954747 342_na     113_aa cutA Divalent-cation tolerance protein CutA
4514 UFUC01000001.1 GCA_900445785.1_04514 CDS open 3954854-3955291 438_na     145_aa putative HIT-like protein
4515 UFUC01000001.1 GCA_900445785.1_04515 CDS open 3955420-3955815 396_na     131_aa rplQ 50S ribosomal protein L17
4516 UFUC01000001.1 GCA_900445785.1_04516 CDS open 3955974-3956960 987_na     328_aa rpoA DNA-directed RNA polymerase subunit alpha
4517 UFUC01000001.1 GCA_900445785.1_04517 CDS open 3957175-3957798 624_na     207_aa rpsD 30S ribosomal protein S4
4518 UFUC01000001.1 GCA_900445785.1_04518 CDS open 3957810-3958211 402_na     133_aa rpsK 30S ribosomal protein S11
4519 UFUC01000001.1 GCA_900445785.1_04519 CDS open 3958227-3958592 366_na     121_aa rpsM 30S ribosomal protein S13
4520 UFUC01000001.1 misc_RNA open 3958560-3958668 Alpha_RBS
4521 UFUC01000001.1 GCA_900445785.1_04521 CDS open 3958634-3958747 114_na     37_aa rpmJ 50S ribosomal protein L36
4522 UFUC01000001.1 GCA_900445785.1_04522 CDS open 3958782-3959000 219_na     72_aa infA_2 Translation initiation factor IF-1
4523 UFUC01000001.1 GCA_900445785.1_04523 CDS open 3959010-3960335 1326_na     441_aa secY Protein translocase subunit SecY
4524 UFUC01000001.1 GCA_900445785.1_04524 CDS open 3960350-3960790 441_na     146_aa rplO 50S ribosomal protein L15
4525 UFUC01000001.1 GCA_900445785.1_04525 CDS open 3960800-3960985 186_na     61_aa rpmD 50S ribosomal protein L30
4526 UFUC01000001.1 GCA_900445785.1_04526 CDS open 3960989-3961513 525_na     174_aa rpsE 30S ribosomal protein S5
4527 UFUC01000001.1 GCA_900445785.1_04527 CDS open 3961529-3961891 363_na     120_aa rplR 50S ribosomal protein L18
4528 UFUC01000001.1 GCA_900445785.1_04528 CDS open 3961913-3962446 534_na     177_aa rplF 50S ribosomal protein L6
4529 UFUC01000001.1 GCA_900445785.1_04529 CDS open 3962457-3962852 396_na     131_aa rpsH 30S ribosomal protein S8
4530 UFUC01000001.1 GCA_900445785.1_04530 CDS open 3962863-3963168 306_na     101_aa rpsN 30S ribosomal protein S14
4531 UFUC01000001.1 GCA_900445785.1_04531 CDS open 3963181-3963720 540_na     179_aa rplE 50S ribosomal protein L5
4532 UFUC01000001.1 GCA_900445785.1_04532 CDS open 3963733-3964053 321_na     106_aa rplX 50S ribosomal protein L24
4533 UFUC01000001.1 GCA_900445785.1_04533 CDS open 3964064-3964432 369_na     122_aa rplN 50S ribosomal protein L14
4534 UFUC01000001.1 GCA_900445785.1_04534 CDS open 3964571-3965278 708_na     235_aa hypothetical protein
4535 UFUC01000001.1 GCA_900445785.1_04535 CDS open 3965327-3966754 1428_na     475_aa araE_2 Alpha-ketoglutaric semialdehyde dehydrogenase 1
4536 UFUC01000001.1 GCA_900445785.1_04536 CDS open 3967177-3967704 528_na     175_aa hypothetical protein
4537 UFUC01000001.1 GCA_900445785.1_04537 CDS open 3967870-3968151 282_na     93_aa rpsQ 30S ribosomal protein S17
4538 UFUC01000001.1 GCA_900445785.1_04538 CDS open 3968153-3968344 192_na     63_aa rpmC 50S ribosomal protein L29
4539 UFUC01000001.1 GCA_900445785.1_04539 CDS open 3968355-3968771 417_na     138_aa rplP 50S ribosomal protein L16
4540 UFUC01000001.1 GCA_900445785.1_04540 CDS open 3968774-3969565 792_na     263_aa rpsC 30S ribosomal protein S3
4541 UFUC01000001.1 GCA_900445785.1_04541 CDS open 3969575-3969904 330_na     109_aa rplV 50S ribosomal protein L22
4542 UFUC01000001.1 GCA_900445785.1_04542 CDS open 3969908-3970183 276_na     91_aa rpsS 30S ribosomal protein S19
4543 UFUC01000001.1 GCA_900445785.1_04543 CDS open 3970196-3971023 828_na     275_aa rplB 50S ribosomal protein L2
4544 UFUC01000001.1 GCA_900445785.1_04544 CDS open 3971024-3971320 297_na     98_aa rplW 50S ribosomal protein L23
4545 UFUC01000001.1 GCA_900445785.1_04545 CDS open 3971317-3971934 618_na     205_aa rplD 50S ribosomal protein L4
4546 UFUC01000001.1 GCA_900445785.1_04546 CDS open 3971939-3972628 690_na     229_aa rplC 50S ribosomal protein L3
4547 UFUC01000001.1 GCA_900445785.1_04547 CDS open 3972980-3973291 312_na     103_aa rpsJ 30S ribosomal protein S10
4548 UFUC01000001.1 GCA_900445785.1_04548 CDS open 3973355-3974545 1191_na     396_aa tufA_1 Elongation factor Tu
4549 UFUC01000001.1 GCA_900445785.1_04549 CDS open 3974622-3976724 2103_na     700_aa fusA_2 Elongation factor G
4550 UFUC01000001.1 GCA_900445785.1_04550 CDS open 3976742-3977212 471_na     156_aa rpsG 30S ribosomal protein S7
4551 UFUC01000001.1 GCA_900445785.1_04551 CDS open 3977376-3977816 441_na     146_aa rpsL 30S ribosomal protein S12
4552 UFUC01000001.1 GCA_900445785.1_04552 CDS open 3978330-3978605 276_na     91_aa frmR Transcriptional repressor FrmR
4553 UFUC01000001.1 GCA_900445785.1_04553 CDS open 3978611-3979546 936_na     311_aa czcD Cadmium%2C cobalt and zincH(+)-K(+) antiporter
4554 UFUC01000001.1 GCA_900445785.1_04554 CDS open 3979576-3980283 708_na     235_aa arcA Aerobic respiration control protein ArcA
4555 UFUC01000001.1 GCA_900445785.1_04555 CDS open 3980658-3981380 723_na     240_aa regX3 Sensory transduction protein regX3
4556 UFUC01000001.1 GCA_900445785.1_04556 CDS open 3981398-3982504 1107_na     368_aa hypothetical protein
4557 UFUC01000001.1 GCA_900445785.1_04557 CDS open 3982506-3983354 849_na     282_aa hypothetical protein
4558 UFUC01000001.1 GCA_900445785.1_04558 CDS open 3983299-3984798 1500_na     499_aa sasA_10 Adaptive-response sensory-kinase SasA
4559 UFUC01000001.1 GCA_900445785.1_04559 CDS open 3984814-3985935 1122_na     373_aa hypothetical protein
4560 UFUC01000001.1 GCA_900445785.1_04560 CDS open 3986224-3986685 462_na     153_aa hypothetical protein
4561 UFUC01000001.1 GCA_900445785.1_04561 CDS open 3986794-3991038 4245_na     1414_aa rpoC DNA-directed RNA polymerase subunit beta
4562 UFUC01000001.1 GCA_900445785.1_04562 CDS open 3991038-3995150 4113_na     1370_aa rpoB DNA-directed RNA polymerase subunit beta
4563 UFUC01000001.1 GCA_900445785.1_04563 CDS open 3995310-3995693 384_na     127_aa rplL 50S ribosomal protein L7L12
4564 UFUC01000001.1 GCA_900445785.1_04564 CDS open 3995775-3996299 525_na     174_aa rplJ 50S ribosomal protein L10
4565 UFUC01000001.1 GCA_900445785.1_04565 CDS open 3996542-3997240 699_na     232_aa rplA 50S ribosomal protein L1
4566 UFUC01000001.1 GCA_900445785.1_04566 CDS open 3997243-3997674 432_na     143_aa rplK 50S ribosomal protein L11
4567 UFUC01000001.1 GCA_900445785.1_04567 CDS open 3997738-3998271 534_na     177_aa nusG Transcription terminationantitermination protein NusG
4568 UFUC01000001.1 GCA_900445785.1_04568 CDS open 3998281-3998562 282_na     93_aa secE Protein translocase subunit SecE
4569 UFUC01000001.1 tRNA open 3998714-3998789 tRNA-Trp(cca)
4570 UFUC01000001.1 GCA_900445785.1_04570 CDS open 3998900-4000090 1191_na     396_aa tufA_2 Elongation factor Tu
4571 UFUC01000001.1 tRNA open 4000147-4000221 tRNA-Thr(ggt)
4572 UFUC01000001.1 tRNA open 4000228-4000301 tRNA-Gly(tcc)
4573 UFUC01000001.1 tRNA open 4000490-4000576 tRNA-Tyr(gta)
4574 UFUC01000001.1 GCA_900445785.1_04574 CDS open 4000686-4001687 1002_na     333_aa ansA putative L-asparaginase
4575 UFUC01000001.1 GCA_900445785.1_04575 CDS open 4001680-4002597 918_na     305_aa parB putative chromosome-partitioning protein ParB
4576 UFUC01000001.1 GCA_900445785.1_04576 CDS open 4002641-4003447 807_na     268_aa hypothetical protein
4577 UFUC01000001.1 GCA_900445785.1_04577 CDS open 4003454-4004251 798_na     265_aa parA Chromosome partitioning protein ParA
4578 UFUC01000001.1 GCA_900445785.1_04578 CDS open 4004248-4004940 693_na     230_aa rsmG Ribosomal RNA small subunit methyltransferase G
4579 UFUC01000001.1 GCA_900445785.1_04579 CDS open 4004937-4006856 1920_na     639_aa mnmG tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
4580 UFUC01000001.1 GCA_900445785.1_04580 CDS open 4007120-4007848 729_na     242_aa hypothetical protein
4581 UFUC01000001.1 GCA_900445785.1_04581 CDS open 4008648-4008854 207_na     68_aa cspA_4 Cold shock protein CspA
4582 UFUC01000001.1 GCA_900445785.1_04582 CDS open 4009253-4010419 1167_na     388_aa ybdL Methionine aminotransferase
4583 UFUC01000001.1 GCA_900445785.1_04583 CDS open 4010495-4012018 1524_na     507_aa hypothetical protein
4584 UFUC01000001.1 GCA_900445785.1_04584 CDS open 4012015-4012452 438_na     145_aa hypothetical protein
4585 UFUC01000001.1 GCA_900445785.1_04585 CDS open 4012557-4013561 1005_na     334_aa hypothetical protein
4586 UFUC01000001.1 GCA_900445785.1_04586 CDS open 4013682-4015145 1464_na     487_aa sasA_11 Adaptive-response sensory-kinase SasA
4587 UFUC01000001.1 GCA_900445785.1_04587 CDS open 4015132-4015812 681_na     226_aa tctD_4 Transcriptional regulatory protein tctD
4588 UFUC01000001.1 GCA_900445785.1_04588 CDS open 4016370-4017644 1275_na     424_aa hypothetical protein
4589 UFUC01000001.1 GCA_900445785.1_04589 CDS open 4017589-4018941 1353_na     450_aa mnmE tRNA modification GTPase MnmE
4590 UFUC01000001.1 GCA_900445785.1_04590 CDS open 4019058-4020644 1587_na     528_aa gsiB_8 Glutathione-binding protein GsiB
4591 UFUC01000001.1 GCA_900445785.1_04591 CDS open 4020664-4021638 975_na     324_aa gsiC_10 Glutathione transport system permease protein GsiC
4592 UFUC01000001.1 GCA_900445785.1_04592 CDS open 4021635-4022555 921_na     306_aa ddpC_2 putative D%2CD-dipeptide transport system permease protein DdpC
4593 UFUC01000001.1 GCA_900445785.1_04593 CDS open 4022582-4023583 1002_na     333_aa oppD_3 Oligopeptide transport ATP-binding protein OppD
4594 UFUC01000001.1 GCA_900445785.1_04594 CDS open 4023583-4024596 1014_na     337_aa oppF Oligopeptide transport ATP-binding protein OppF
4595 UFUC01000001.1 GCA_900445785.1_04595 CDS open 4024654-4025853 1200_na     399_aa hipO_5 Hippurate hydrolase
4596 UFUC01000001.1 GCA_900445785.1_04596 CDS open 4025983-4026906 924_na     307_aa tauD_2 Alpha-ketoglutarate-dependent taurine dioxygenase
4597 UFUC01000001.1 GCA_900445785.1_04597 CDS open 4026950-4027993 1044_na     347_aa hypothetical protein
4598 UFUC01000001.1 GCA_900445785.1_04598 CDS open 4027995-4028810 816_na     271_aa nrtD_6 Nitrate import ATP-binding protein NrtD
4599 UFUC01000001.1 GCA_900445785.1_04599 CDS open 4028807-4029688 882_na     293_aa hypothetical protein
4600 UFUC01000001.1 GCA_900445785.1_04600 CDS open 4029750-4031189 1440_na     479_aa katA Catalase
4601 UFUC01000001.1 GCA_900445785.1_04601 CDS open 4031454-4033145 1692_na     563_aa yidC Membrane protein insertase YidC
4602 UFUC01000001.1 GCA_900445785.1_04602 CDS open 4033463-4033834 372_na     123_aa rnpA Ribonuclease P protein component
4603 UFUC01000001.1 GCA_900445785.1_04603 CDS open 4033930-4034064 135_na     44_aa rpmH 50S ribosomal protein L34