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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Escherichia coli (GCA_902825205.1)

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PROKKA Annotations for GCA_902825205.1
Genome Selected: Escherichia coli
ContigsBases CDSrRNA tmRNAtRNA
1 4715938 4345 22 1 86
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Annotation Table [page:10]    |    Number of Records Found: 4673 [10 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  6  7  8  9  10  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
4501 LR782232.1 GCA_902825205.1_04501 CDS open 4544862-4546217 1356_na     451_aa melA Alpha-galactosidase
4502 LR782232.1 GCA_902825205.1_04502 CDS open 4546500-4547408 909_na     302_aa melR_2 Melibiose operon regulatory protein
4503 LR782232.1 GCA_902825205.1_04503 CDS open 4547604-4549874 2271_na     756_aa adiA Biodegradative arginine decarboxylase
4504 LR782232.1 GCA_902825205.1_04504 CDS open 4550199-4550960 762_na     253_aa gadX_2 HTH-type transcriptional regulator GadX
4505 LR782232.1 GCA_902825205.1_04505 CDS open 4551097-4552434 1338_na     445_aa adiC Arginineagmatine antiporter
4506 LR782232.1 GCA_902825205.1_04506 CDS open 4552538-4554181 1644_na     547_aa eptA Phosphoethanolamine transferase EptA
4507 LR782232.1 GCA_902825205.1_04507 CDS open 4554178-4554846 669_na     222_aa basR Transcriptional regulatory protein BasR
4508 LR782232.1 GCA_902825205.1_04508 CDS open 4554847-4555947 1101_na     366_aa basS Sensor protein BasS
4509 LR782232.1 misc_RNA open 4555916-4556081 STnc630
4510 LR782232.1 GCA_902825205.1_04510 CDS open 4555923-4556012 90_na     29_aa hypothetical protein
4511 LR782232.1 GCA_902825205.1_04511 CDS open 4556124-4557626 1503_na     500_aa proP Prolinebetaine transporter
4512 LR782232.1 GCA_902825205.1_04512 CDS open 4557890-4558768 879_na     292_aa hypothetical protein
4513 LR782232.1 GCA_902825205.1_04513 CDS open 4558765-4560993 2229_na     742_aa crfC Clamp-binding protein CrfC
4514 LR782232.1 GCA_902825205.1_04514 CDS open 4561395-4561730 336_na     111_aa hypothetical protein
4515 LR782232.1 misc_RNA open 4561748-4561825 naRNA4
4516 LR782232.1 GCA_902825205.1_04516 CDS open 4561890-4562333 444_na     147_aa hypothetical protein
4517 LR782232.1 GCA_902825205.1_04517 CDS open 4562466-4563254 789_na     262_aa phnC Phosphate-import ATP-binding protein PhnC
4518 LR782232.1 GCA_902825205.1_04518 CDS open 4563279-4564295 1017_na     338_aa hypothetical protein
4519 LR782232.1 misc_RNA open 4564302-4564382 naRNA4
4520 LR782232.1 GCA_902825205.1_04520 CDS open 4564401-4565180 780_na     259_aa phnE Phosphate-import permease protein PhnE
4521 LR782232.1 GCA_902825205.1_04521 CDS open 4565201-4565926 726_na     241_aa phnF putative transcriptional regulator PhnF
4522 LR782232.1 GCA_902825205.1_04522 CDS open 4565927-4566379 453_na     150_aa phnG Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG
4523 LR782232.1 GCA_902825205.1_04523 CDS open 4566376-4566960 585_na     194_aa phnH Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH
4524 LR782232.1 GCA_902825205.1_04524 CDS open 4566960-4568024 1065_na     354_aa phnI Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI
4525 LR782232.1 GCA_902825205.1_04525 CDS open 4568017-4568862 846_na     281_aa phnJ Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase
4526 LR782232.1 GCA_902825205.1_04526 CDS open 4568859-4569617 759_na     252_aa phnK Putative phosphonates utilization ATP-binding protein PhnK
4527 LR782232.1 GCA_902825205.1_04527 CDS open 4569728-4570408 681_na     226_aa phnL Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL
4528 LR782232.1 GCA_902825205.1_04528 CDS open 4570405-4571541 1137_na     378_aa phnM Alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase
4529 LR782232.1 GCA_902825205.1_04529 CDS open 4571541-4572098 558_na     185_aa phnN Ribose 1%2C5-bisphosphate phosphokinase PhnN
4530 LR782232.1 GCA_902825205.1_04530 CDS open 4572085-4572519 435_na     144_aa phnO Aminoalkylphosphonate N-acetyltransferase
4531 LR782232.1 GCA_902825205.1_04531 CDS open 4572521-4573279 759_na     252_aa phnP Phosphoribosyl 1%2C2-cyclic phosphate phosphodiesterase
4532 LR782232.1 GCA_902825205.1_04532 CDS open 4573426-4573755 330_na     109_aa hypothetical protein
4533 LR782232.1 GCA_902825205.1_04533 CDS open 4573824-4574141 318_na     105_aa lacA Galactose-6-phosphate isomerase subunit LacA
4534 LR782232.1 GCA_902825205.1_04534 CDS open 4574394-4576379 1986_na     661_aa yjcS Putative alkylaryl-sulfatase YjcS
4535 LR782232.1 GCA_902825205.1_04535 CDS open 4576588-4576863 276_na     91_aa hypothetical protein
4536 LR782232.1 GCA_902825205.1_04536 CDS open 4576882-4577913 1032_na     343_aa mdtN Multidrug resistance protein MdtN
4537 LR782232.1 GCA_902825205.1_04537 CDS open 4577913-4579964 2052_na     683_aa mdtO Multidrug resistance protein MdtO
4538 LR782232.1 GCA_902825205.1_04538 CDS open 4579961-4581427 1467_na     488_aa cusC_2 Cation efflux system protein CusC
4539 LR782232.1 GCA_902825205.1_04539 CDS open 4581625-4582044 420_na     139_aa fdhF_1 Formate dehydrogenase H
4540 LR782232.1 misc_RNA open 4582037-4582091 SECIS_2
4541 LR782232.1 GCA_902825205.1_04541 CDS open 4582093-4583772 1680_na     559_aa fdhF_2 Formate dehydrogenase H
4542 LR782232.1 GCA_902825205.1_04542 CDS open 4583866-4584555 690_na     229_aa hypothetical protein
4543 LR782232.1 GCA_902825205.1_04543 CDS open 4584633-4585946 1314_na     437_aa gltP Protonglutamate-aspartate symporter
4544 LR782232.1 GCA_902825205.1_04544 CDS open 4586288-4586884 597_na     198_aa nrfG Formate-dependent nitrite reductase complex subunit NrfG
4545 LR782232.1 GCA_902825205.1_04545 CDS open 4586881-4587264 384_na     127_aa ccmH_2 Cytochrome c-type biogenesis protein CcmH
4546 LR782232.1 GCA_902825205.1_04546 CDS open 4587257-4588879 1623_na     540_aa ccmF_2 Cytochrome c-type biogenesis protein CcmF
4547 LR782232.1 GCA_902825205.1_04547 CDS open 4588995-4589951 957_na     318_aa hypothetical protein
4548 LR782232.1 GCA_902825205.1_04548 CDS open 4589948-4590619 672_na     223_aa ydhX_2 putative ferredoxin-like protein YdhX
4549 LR782232.1 GCA_902825205.1_04549 CDS open 4590616-4591182 567_na     188_aa nrfB Cytochrome c-type protein NrfB
4550 LR782232.1 GCA_902825205.1_04550 CDS open 4591227-4592663 1437_na     478_aa nrfA Cytochrome c-552
4551 LR782232.1 GCA_902825205.1_04551 CDS open 4593055-4595013 1959_na     652_aa acs_2 Acetyl-coenzyme A synthetase
4552 LR782232.1 misc_RNA open 4595051-4595122 naRNA4
4553 LR782232.1 GCA_902825205.1_04553 CDS open 4595214-4595528 315_na     104_aa yjcH Inner membrane protein YjcH
4554 LR782232.1 GCA_902825205.1_04554 CDS open 4595525-4597174 1650_na     549_aa actP Cationacetate symporter ActP
4555 LR782232.1 GCA_902825205.1_04555 CDS open 4597352-4598644 1293_na     430_aa hypothetical protein
4556 LR782232.1 GCA_902825205.1_04556 CDS open 4598798-4600447 1650_na     549_aa nhaK Sodium%2C potassium%2C lithium and rubidiumH(+) antiporter
4557 LR782232.1 GCA_902825205.1_04557 CDS open 4600599-4601948 1350_na     449_aa ghxP Guaninehypoxanthine permease GhxP
4558 LR782232.1 misc_RNA open 4602361-4602501 sraL
4559 LR782232.1 GCA_902825205.1_04559 CDS open 4602494-4602958 465_na     154_aa soxR Redox-sensitive transcriptional activator SoxR
4560 LR782232.1 GCA_902825205.1_04560 CDS open 4603044-4603367 324_na     107_aa soxS Regulatory protein SoxS
4561 LR782232.1 GCA_902825205.1_04561 CDS open 4603370-4604956 1587_na     528_aa pdeC putative cyclic di-GMP phosphodiesterase PdeC
4562 LR782232.1 GCA_902825205.1_04562 CDS open 4605386-4605667 282_na     93_aa hypothetical protein
4563 LR782232.1 GCA_902825205.1_04563 CDS open 4605766-4606302 537_na     178_aa ssb Single-stranded DNA-binding protein
4564 LR782232.1 GCA_902825205.1_04564 CDS open 4606556-4609378 2823_na     940_aa uvrA UvrABC system protein A
4565 LR782232.1 GCA_902825205.1_04565 CDS open 4609413-4609769 357_na     118_aa yjbR putative protein YjbR
4566 LR782232.1 GCA_902825205.1_04566 CDS open 4609773-4610189 417_na     138_aa hypothetical protein
4567 LR782232.1 GCA_902825205.1_04567 CDS open 4610300-4611013 714_na     237_aa aphA Class B acid phosphatase
4568 LR782232.1 GCA_902825205.1_04568 CDS open 4611415-4611918 504_na     167_aa hypothetical protein
4569 LR782232.1 GCA_902825205.1_04569 CDS open 4612140-4613333 1194_na     397_aa tyrB Aromatic-amino-acid aminotransferase
4570 LR782232.1 GCA_902825205.1_04570 CDS open 4613586-4614665 1080_na     359_aa alr Alanine racemase%2C biosynthetic
4571 LR782232.1 GCA_902825205.1_04571 CDS open 4614718-4616133 1416_na     471_aa dnaB Replicative DNA helicase
4572 LR782232.1 GCA_902825205.1_04572 CDS open 4616216-4617199 984_na     327_aa qorA Quinone oxidoreductase 1
4573 LR782232.1 GCA_902825205.1_04573 CDS open 4617365-4617607 243_na     80_aa pspG Phage shock protein G
4574 LR782232.1 GCA_902825205.1_04574 CDS open 4617741-4618778 1038_na     345_aa dusA tRNA-dihydrouridine(2020a) synthase
4575 LR782232.1 GCA_902825205.1_04575 CDS open 4619141-4619848 708_na     235_aa hypothetical protein
4576 LR782232.1 GCA_902825205.1_04576 CDS open 4619872-4620126 255_na     84_aa hypothetical protein
4577 LR782232.1 GCA_902825205.1_04577 CDS open 4620444-4620959 516_na     171_aa zur Zinc uptake regulation protein
4578 LR782232.1 GCA_902825205.1_04578 CDS open 4621001-4621210 210_na     69_aa hypothetical protein
4579 LR782232.1 GCA_902825205.1_04579 CDS open 4621326-4622651 1326_na     441_aa dinF DNA damage-inducible protein F
4580 LR782232.1 GCA_902825205.1_04580 CDS open 4622724-4623332 609_na     202_aa lexA LexA repressor
4581 LR782232.1 GCA_902825205.1_04581 CDS open 4623442-4623810 369_na     122_aa dgkA Diacylglycerol kinase
4582 LR782232.1 GCA_902825205.1_04582 CDS open 4623981-4626404 2424_na     807_aa plsB Glycerol-3-phosphate acyltransferase
4583 LR782232.1 GCA_902825205.1_04583 CDS open 4626559-4627431 873_na     290_aa ubiA 4-hydroxybenzoate octaprenyltransferase
4584 LR782232.1 GCA_902825205.1_04584 CDS open 4627444-4627941 498_na     165_aa ubiC Chorismate pyruvate-lyase
4585 LR782232.1 GCA_902825205.1_04585 CDS open 4628164-4629492 1329_na     442_aa hypothetical protein
4586 LR782232.1 GCA_902825205.1_04586 CDS open 4629550-4629744 195_na     64_aa hypothetical protein
4587 LR782232.1 GCA_902825205.1_04587 CDS open 4629846-4629998 153_na     50_aa hypothetical protein
4588 LR782232.1 GCA_902825205.1_04588 CDS open 4629973-4630893 921_na     306_aa hypothetical protein
4589 LR782232.1 misc_RNA open 4631053-4631123 naRNA4
4590 LR782232.1 GCA_902825205.1_04590 CDS open 4631136-4632476 1341_na     446_aa lamB Maltoporin
4591 LR782232.1 GCA_902825205.1_04591 CDS open 4632548-4633663 1116_na     371_aa malK Maltosemaltodextrin import ATP-binding protein MalK
4592 LR782232.1 GCA_902825205.1_04592 CDS open 4634028-4635218 1191_na     396_aa malE Maltosemaltodextrin-binding periplasmic protein
4593 LR782232.1 misc_RNA open 4635282-4635352 naRNA4
4594 LR782232.1 GCA_902825205.1_04594 CDS open 4635372-4636916 1545_na     514_aa malF Maltosemaltodextrin transport system permease protein MalF
4595 LR782232.1 GCA_902825205.1_04595 CDS open 4636931-4637821 891_na     296_aa malG Maltosemaltodextrin transport system permease protein MalG
4596 LR782232.1 GCA_902825205.1_04596 CDS open 4638193-4639668 1476_na     491_aa xylE D-xylose-proton symporter
4597 LR782232.1 GCA_902825205.1_04597 CDS open 4639712-4640122 411_na     136_aa psiE Protein PsiE
4598 LR782232.1 GCA_902825205.1_04598 CDS open 4640717-4642813 2097_na     698_aa hypothetical protein
4599 LR782232.1 GCA_902825205.1_04599 CDS open 4642813-4643550 738_na     245_aa hypothetical protein
4600 LR782232.1 GCA_902825205.1_04600 CDS open 4643547-4644185 639_na     212_aa gfcB_2 putative lipoprotein GfcB
4601 LR782232.1 GCA_902825205.1_04601 CDS open 4644299-4644541 243_na     80_aa hypothetical protein
4602 LR782232.1 misc_RNA open 4644738-4644887 STnc430
4603 LR782232.1 GCA_902825205.1_04603 CDS open 4644896-4646545 1650_na     549_aa pgi Glucose-6-phosphate isomerase
4604 LR782232.1 misc_RNA open 4646782-4646978 Lysine
4605 LR782232.1 GCA_902825205.1_04605 CDS open 4647070-4648419 1350_na     449_aa lysC Lysine-sensitive aspartokinase 3
4606 LR782232.1 GCA_902825205.1_04606 CDS open 4648564-4649490 927_na     308_aa hypothetical protein
4607 LR782232.1 GCA_902825205.1_04607 CDS open 4649526-4649870 345_na     114_aa hypothetical protein
4608 LR782232.1 GCA_902825205.1_04608 CDS open 4649857-4650291 435_na     144_aa hypothetical protein
4609 LR782232.1 GCA_902825205.1_04609 CDS open 4650324-4651451 1128_na     375_aa hypothetical protein
4610 LR782232.1 GCA_902825205.1_04610 CDS open 4651981-4652253 273_na     90_aa hypothetical protein
4611 LR782232.1 GCA_902825205.1_04611 CDS open 4652254-4653126 873_na     290_aa rluF Dual-specificity RNA pseudouridine synthase RluF
4612 LR782232.1 GCA_902825205.1_04612 CDS open 4653338-4654027 690_na     229_aa pepE Peptidase E
4613 LR782232.1 GCA_902825205.1_04613 CDS open 4654118-4655749 1632_na     543_aa hypothetical protein
4614 LR782232.1 GCA_902825205.1_04614 CDS open 4655969-4659652 3684_na     1227_aa metH Methionine synthase
4615 LR782232.1 GCA_902825205.1_04615 CDS open 4659852-4660676 825_na     274_aa iclR Transcriptional repressor IclR
4616 LR782232.1 GCA_902825205.1_04616 CDS open 4660994-4662214 1221_na     406_aa hypothetical protein
4617 LR782232.1 GCA_902825205.1_04617 CDS open 4662211-4662567 357_na     118_aa hypothetical protein
4618 LR782232.1 GCA_902825205.1_04618 CDS open 4662536-4664272 1737_na     578_aa aceK Isocitrate dehydrogenase kinasephosphatase
4619 LR782232.1 misc_RNA open 4664352-4664429 naRNA4
4620 LR782232.1 misc_RNA open 4664450-4664527 naRNA4
4621 LR782232.1 GCA_902825205.1_04621 CDS open 4664553-4665857 1305_na     434_aa aceA Isocitrate lyase
4622 LR782232.1 GCA_902825205.1_04622 CDS open 4665887-4667488 1602_na     533_aa aceB Malate synthase A
4623 LR782232.1 GCA_902825205.1_04623 CDS open 4667757-4668686 930_na     309_aa metAS Homoserine O-succinyltransferase
4624 LR782232.1 GCA_902825205.1_04624 CDS open 4668843-4669286 444_na     147_aa yjaB Peptidyl-lysine N-acetyltransferase YjaB
4625 LR782232.1 rRNA open 4669404-4669514 5S ribosomal RNA
4626 LR782232.1 rRNA open 4669613-4672512 23S ribosomal RNA
4627 LR782232.1 misc_RNA open 4672522-4672630 StyR-44
4628 LR782232.1 tRNA open 4672708-4672783 tRNA-Glu(ttc)
4629 LR782232.1 rRNA open 4672870-4674407 16S ribosomal RNA
4630 LR782232.1 GCA_902825205.1_04630 CDS open 4675026-4676615 1590_na     529_aa purH Bifunctional purine biosynthesis protein PurH
4631 LR782232.1 GCA_902825205.1_04631 CDS open 4676627-4677916 1290_na     429_aa purD Phosphoribosylamine--glycine ligase
4632 LR782232.1 GCA_902825205.1_04632 CDS open 4677913-4679238 1326_na     441_aa zraR Transcriptional regulatory protein ZraR
4633 LR782232.1 GCA_902825205.1_04633 CDS open 4679235-4680611 1377_na     458_aa zraS Sensor protein ZraS
4634 LR782232.1 GCA_902825205.1_04634 CDS open 4680718-4680846 129_na     42_aa hypothetical protein
4635 LR782232.1 GCA_902825205.1_04635 CDS open 4680849-4681274 426_na     141_aa zraP Zinc resistance-associated protein
4636 LR782232.1 GCA_902825205.1_04636 CDS open 4681276-4681911 636_na     211_aa hypothetical protein
4637 LR782232.1 GCA_902825205.1_04637 CDS open 4681984-4682256 273_na     90_aa hupA DNA-binding protein HU-alpha
4638 LR782232.1 GCA_902825205.1_04638 CDS open 4682443-4683033 591_na     196_aa putative protein
4639 LR782232.1 GCA_902825205.1_04639 CDS open 4683076-4683747 672_na     223_aa nfi Endonuclease V
4640 LR782232.1 GCA_902825205.1_04640 CDS open 4683757-4684821 1065_na     354_aa hemE Uroporphyrinogen decarboxylase
4641 LR782232.1 GCA_902825205.1_04641 CDS open 4684861-4685634 774_na     257_aa nudC NADH pyrophosphatase
4642 LR782232.1 GCA_902825205.1_04642 CDS open 4685729-4686205 477_na     158_aa rsd Regulator of sigma D
4643 LR782232.1 misc_RNA open 4686257-4686357 TPP
4644 LR782232.1 GCA_902825205.1_04644 CDS open 4686437-4688332 1896_na     631_aa thiC Phosphomethylpyrimidine synthase
4645 LR782232.1 GCA_902825205.1_04645 CDS open 4688332-4688967 636_na     211_aa thiE Thiamine-phosphate synthase
4646 LR782232.1 GCA_902825205.1_04646 CDS open 4688960-4689715 756_na     251_aa thiF Sulfur carrier protein ThiS adenylyltransferase
4647 LR782232.1 GCA_902825205.1_04647 CDS open 4689699-4689899 201_na     66_aa thiS Sulfur carrier protein ThiS
4648 LR782232.1 GCA_902825205.1_04648 CDS open 4689901-4690671 771_na     256_aa thiG Thiazole synthase
4649 LR782232.1 GCA_902825205.1_04649 CDS open 4690668-4691801 1134_na     377_aa thiH 2-iminoacetate synthase
4650 LR782232.1 misc_RNA open 4692049-4692209 sroH
4651 LR782232.1 GCA_902825205.1_04651 CDS open 4692211-4692750 540_na     179_aa htrC Heat shock protein C
4652 LR782232.1 GCA_902825205.1_04652 CDS open 4692963-4697186 4224_na     1407_aa rpoC DNA-directed RNA polymerase subunit beta
4653 LR782232.1 GCA_902825205.1_04653 CDS open 4697263-4701291 4029_na     1342_aa rpoB DNA-directed RNA polymerase subunit beta
4654 LR782232.1 misc_RNA open 4701545-4701606 P26
4655 LR782232.1 GCA_902825205.1_04655 CDS open 4701611-4701976 366_na     121_aa rplL 50S ribosomal protein L7L12
4656 LR782232.1 GCA_902825205.1_04656 CDS open 4702043-4702540 498_na     165_aa rplJ 50S ribosomal protein L10
4657 LR782232.1 GCA_902825205.1_04657 CDS open 4702953-4703657 705_na     234_aa rplA 50S ribosomal protein L1
4658 LR782232.1 GCA_902825205.1_04658 CDS open 4703661-4704089 429_na     142_aa rplK 50S ribosomal protein L11
4659 LR782232.1 GCA_902825205.1_04659 CDS open 4704248-4704793 546_na     181_aa nusG Transcription terminationantitermination protein NusG
4660 LR782232.1 GCA_902825205.1_04660 CDS open 4704795-4705178 384_na     127_aa secE Protein translocase subunit SecE
4661 LR782232.1 GCA_902825205.1_04661 CDS open 4705408-4706592 1185_na     394_aa tufB Elongation factor Tu 2
4662 LR782232.1 tRNA open 4706707-4706782 tRNA-Thr(ggt)
4663 LR782232.1 tRNA open 4706789-4706863 tRNA-Gly(tcc)
4664 LR782232.1 tRNA open 4706980-4707064 tRNA-Tyr(gta)
4665 LR782232.1 tRNA open 4707073-4707148 tRNA-Thr(tgt)
4666 LR782232.1 GCA_902825205.1_04666 CDS open 4707534-4708460 927_na     308_aa coaA_2 Pantothenate kinase
4667 LR782232.1 GCA_902825205.1_04667 CDS open 4708489-4709454 966_na     321_aa birA Bifunctional ligaserepressor BirA
4668 LR782232.1 GCA_902825205.1_04668 CDS open 4709451-4710479 1029_na     342_aa murB UDP-N-acetylenolpyruvoylglucosamine reductase
4669 LR782232.1 rRNA open 4710619-4710729 5S ribosomal RNA
4670 LR782232.1 rRNA open 4710828-4713730 23S ribosomal RNA
4671 LR782232.1 misc_RNA open 4713740-4713848 StyR-44
4672 LR782232.1 tRNA open 4713926-4714001 tRNA-Glu(ttc)
4673 LR782232.1 rRNA open 4714088-4715627 16S ribosomal RNA