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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Porphyromonas sp. HMT-278 (GCA_916048245.1)

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PROKKA Annotations for GCA_916048245.1
Genome Selected: Porphyromonas sp. HMT-278
ContigsBases CDSrRNA tmRNAtRNA
144 2,037,934 1610 0 1 36
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Annotation Table [page:4]    |    Number of Records Found: 1655 [4 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
1501 CAJZGS010000100.1 GCA_916048245.1_01501 CDS open 2317-3291 975_na     324_aa hemB Delta-aminolevulinic acid dehydratase
1502 CAJZGS010000100.1 GCA_916048245.1_01502 CDS open 3295-3984 690_na     229_aa hypothetical protein
1503 CAJZGS010000100.1 GCA_916048245.1_01503 CDS open 4009-4707 699_na     232_aa lolD Lipoprotein-releasing system ATP-binding protein LolD
1504 CAJZGS010000100.1 GCA_916048245.1_01504 CDS open 4704-5471 768_na     255_aa hypothetical protein
1505 CAJZGS010000100.1 GCA_916048245.1_01505 CDS open 5468-6055 588_na     195_aa mltG Endolytic murein transglycosylase
1506 CAJZGS010000101.1 GCA_916048245.1_01506 CDS open 626-1750 1125_na     374_aa lpxB Lipid-A-disaccharide synthase
1507 CAJZGS010000101.1 GCA_916048245.1_01507 CDS open 1754-2512 759_na     252_aa surE 5-nucleotidase SurE
1508 CAJZGS010000101.1 GCA_916048245.1_01508 CDS open 2530-3072 543_na     180_aa hypothetical protein
1509 CAJZGS010000101.1 GCA_916048245.1_01509 CDS open 3098-4639 1542_na     513_aa glyQS Glycine--tRNA ligase
1510 CAJZGS010000101.1 GCA_916048245.1_01510 CDS open 4938-5375 438_na     145_aa hypothetical protein
1511 CAJZGS010000101.1 GCA_916048245.1_01511 CDS open 5691-5888 198_na     65_aa hypothetical protein
1512 CAJZGS010000102.1 GCA_916048245.1_01512 CDS open 96-2252 2157_na     718_aa dpp7 Dipeptidyl-peptidase 7
1513 CAJZGS010000102.1 GCA_916048245.1_01513 CDS open 2357-4039 1683_na     560_aa Long-chain-fatty-acid--CoA ligase FadD15
1514 CAJZGS010000102.1 GCA_916048245.1_01514 CDS open 4209-5675 1467_na     488_aa hypothetical protein
1515 CAJZGS010000103.1 GCA_916048245.1_01515 CDS open 299-1153 855_na     284_aa bepA_2 Beta-barrel assembly-enhancing protease
1516 CAJZGS010000103.1 GCA_916048245.1_01516 CDS open 1166-4303 3138_na     1045_aa addB ATP-dependent helicasedeoxyribonuclease subunit B
1517 CAJZGS010000104.1 GCA_916048245.1_01517 CDS open 356-1399 1044_na     347_aa hypothetical protein
1518 CAJZGS010000104.1 GCA_916048245.1_01518 CDS open 2021-3097 1077_na     358_aa hypothetical protein
1519 CAJZGS010000104.1 tRNA open 3537-3610 tRNA-Gly(tcc)
1520 CAJZGS010000104.1 tRNA open 3634-3719 tRNA-Tyr(gta)
1521 CAJZGS010000104.1 GCA_916048245.1_01521 CDS open 3751-4257 507_na     168_aa ribH 6%2C7-dimethyl-8-ribityllumazine synthase
1522 CAJZGS010000104.1 GCA_916048245.1_01522 CDS open 4284-4976 693_na     230_aa cpoB_1 Cell division coordinator CpoB
1523 CAJZGS010000104.1 GCA_916048245.1_01523 CDS open 5412-5717 306_na     101_aa hypothetical protein
1524 CAJZGS010000105.1 GCA_916048245.1_01524 CDS open 56-970 915_na     304_aa hypothetical protein
1525 CAJZGS010000105.1 GCA_916048245.1_01525 CDS open 967-2400 1434_na     477_aa hypothetical protein
1526 CAJZGS010000105.1 GCA_916048245.1_01526 CDS open 2385-3305 921_na     306_aa ribF Bifunctional riboflavin kinaseFMN adenylyltransferase
1527 CAJZGS010000105.1 GCA_916048245.1_01527 CDS open 3305-4495 1191_na     396_aa mshA_4 D-inositol-3-phosphate glycosyltransferase
1528 CAJZGS010000105.1 GCA_916048245.1_01528 CDS open 4507-5583 1077_na     358_aa hypothetical protein
1529 CAJZGS010000106.1 GCA_916048245.1_01529 CDS open 210-2516 2307_na     768_aa hypothetical protein
1530 CAJZGS010000106.1 GCA_916048245.1_01530 CDS open 3088-4134 1047_na     348_aa hypothetical protein
1531 CAJZGS010000106.1 GCA_916048245.1_01531 CDS open 4416-5243 828_na     275_aa hypothetical protein
1532 CAJZGS010000106.1 GCA_916048245.1_01532 CDS open 5427-5651 225_na     74_aa ade Adenine deaminase
1533 CAJZGS010000107.1 GCA_916048245.1_01533 CDS open 96-2153 2058_na     685_aa hypothetical protein
1534 CAJZGS010000107.1 GCA_916048245.1_01534 CDS open 2221-3549 1329_na     442_aa hypothetical protein
1535 CAJZGS010000107.1 GCA_916048245.1_01535 CDS open 3590-4450 861_na     286_aa hel Lipoprotein E
1536 CAJZGS010000107.1 GCA_916048245.1_01536 CDS open 4465-5055 591_na     196_aa tdk Thymidine kinase
1537 CAJZGS010000107.1 GCA_916048245.1_01537 CDS open 5049-5507 459_na     152_aa hypothetical protein
1538 CAJZGS010000108.1 GCA_916048245.1_01538 CDS open 10-867 858_na     285_aa hypothetical protein
1539 CAJZGS010000108.1 GCA_916048245.1_01539 CDS open 1002-2735 1734_na     577_aa hypothetical protein
1540 CAJZGS010000108.1 GCA_916048245.1_01540 CDS open 2800-3222 423_na     140_aa hypothetical protein
1541 CAJZGS010000108.1 GCA_916048245.1_01541 CDS open 3520-3975 456_na     151_aa hypothetical protein
1542 CAJZGS010000108.1 GCA_916048245.1_01542 CDS open 4473-5138 666_na     221_aa hypothetical protein
1543 CAJZGS010000108.1 tRNA open 5515-5590 tRNA-Val(tac)
1544 CAJZGS010000109.1 GCA_916048245.1_01544 CDS open 43-381 339_na     112_aa hypothetical protein
1545 CAJZGS010000109.1 GCA_916048245.1_01545 CDS open 389-1363 975_na     324_aa hypothetical protein
1546 CAJZGS010000109.1 GCA_916048245.1_01546 CDS open 1381-2328 948_na     315_aa hypothetical protein
1547 CAJZGS010000109.1 GCA_916048245.1_01547 CDS open 2347-3645 1299_na     432_aa hypothetical protein
1548 CAJZGS010000109.1 GCA_916048245.1_01548 CDS open 3772-4764 993_na     330_aa hypothetical protein
1549 CAJZGS010000109.1 GCA_916048245.1_01549 CDS open 4965-5459 495_na     164_aa hypothetical protein
1550 CAJZGS010000110.1 GCA_916048245.1_01550 CDS open 395-1180 786_na     261_aa hypothetical protein
1551 CAJZGS010000110.1 GCA_916048245.1_01551 CDS open 1188-2867 1680_na     559_aa glgE Alpha-1%2C4-glucan:maltose-1-phosphate maltosyltransferase
1552 CAJZGS010000110.1 GCA_916048245.1_01552 CDS open 3005-3475 471_na     156_aa hypothetical protein
1553 CAJZGS010000110.1 GCA_916048245.1_01553 CDS open 3889-5046 1158_na     385_aa hypothetical protein
1554 CAJZGS010000111.1 GCA_916048245.1_01554 CDS open 79-4896 4818_na     1605_aa hypothetical protein
1555 CAJZGS010000112.1 GCA_916048245.1_01555 CDS open 3-368 366_na     121_aa hypothetical protein
1556 CAJZGS010000112.1 GCA_916048245.1_01556 CDS open 618-1157 540_na     179_aa hypothetical protein
1557 CAJZGS010000112.1 GCA_916048245.1_01557 CDS open 1263-2207 945_na     314_aa trxB Thioredoxin reductase
1558 CAJZGS010000112.1 GCA_916048245.1_01558 CDS open 2254-2757 504_na     167_aa sigR ECF RNA polymerase sigma factor SigR
1559 CAJZGS010000112.1 GCA_916048245.1_01559 CDS open 2915-3583 669_na     222_aa ung Uracil-DNA glycosylase
1560 CAJZGS010000112.1 GCA_916048245.1_01560 CDS open 3593-4510 918_na     305_aa hypothetical protein
1561 CAJZGS010000112.1 tRNA open 4620-4694 tRNA-His(gtg)
1562 CAJZGS010000113.1 GCA_916048245.1_01562 CDS open 425-847 423_na     140_aa mscL Large-conductance mechanosensitive channel
1563 CAJZGS010000113.1 GCA_916048245.1_01563 CDS open 957-2777 1821_na     606_aa cysG_3 Siroheme synthase
1564 CAJZGS010000113.1 GCA_916048245.1_01564 CDS open 2809-3957 1149_na     382_aa yqhD Alcohol dehydrogenase YqhD
1565 CAJZGS010000113.1 GCA_916048245.1_01565 CDS open 3964-4527 564_na     187_aa hypothetical protein
1566 CAJZGS010000114.1 GCA_916048245.1_01566 CDS open 239-3097 2859_na     952_aa hypothetical protein
1567 CAJZGS010000114.1 GCA_916048245.1_01567 CDS open 3245-3748 504_na     167_aa hypothetical protein
1568 CAJZGS010000114.1 GCA_916048245.1_01568 CDS open 3899-4711 813_na     270_aa serS Serine--tRNA ligase
1569 CAJZGS010000115.1 GCA_916048245.1_01569 CDS open 120-1604 1485_na     494_aa hypothetical protein
1570 CAJZGS010000115.1 tRNA open 1811-1885 tRNA-Thr(tgt)
1571 CAJZGS010000115.1 GCA_916048245.1_01571 CDS open 2052-3248 1197_na     398_aa cgtA GTPase ObgCgtA
1572 CAJZGS010000115.1 GCA_916048245.1_01572 CDS open 3418-3990 573_na     190_aa adk Adenylate kinase
1573 CAJZGS010000115.1 GCA_916048245.1_01573 CDS open 4009-4545 537_na     178_aa hpt Hypoxanthine-guanine phosphoribosyltransferase
1574 CAJZGS010000116.1 GCA_916048245.1_01574 CDS open 156-2054 1899_na     632_aa rho Transcription termination factor Rho
1575 CAJZGS010000116.1 GCA_916048245.1_01575 CDS open 2140-2640 501_na     166_aa fldA Flavodoxin
1576 CAJZGS010000116.1 GCA_916048245.1_01576 CDS open 2787-4442 1656_na     551_aa hypothetical protein
1577 CAJZGS010000117.1 GCA_916048245.1_01577 CDS open 1112-2329 1218_na     405_aa hypothetical protein
1578 CAJZGS010000117.1 GCA_916048245.1_01578 CDS open 2336-3088 753_na     250_aa sufC Vegetative protein 296
1579 CAJZGS010000117.1 GCA_916048245.1_01579 CDS open 3149-4594 1446_na     481_aa sufB FeS cluster assembly protein SufB
1580 CAJZGS010000118.1 GCA_916048245.1_01580 CDS open 96-680 585_na     194_aa nrfH Cytochrome c-type protein NrfH
1581 CAJZGS010000118.1 GCA_916048245.1_01581 CDS open 747-2234 1488_na     495_aa nrfA Cytochrome c-552
1582 CAJZGS010000118.1 GCA_916048245.1_01582 CDS open 2343-3572 1230_na     409_aa hypothetical protein
1583 CAJZGS010000118.1 GCA_916048245.1_01583 CDS open 3700-4488 789_na     262_aa ccsA Cytochrome c biogenesis protein CcsA
1584 CAJZGS010000119.1 GCA_916048245.1_01584 CDS open 253-867 615_na     204_aa hypothetical protein
1585 CAJZGS010000119.1 GCA_916048245.1_01585 CDS open 878-1381 504_na     167_aa Putative low molecular weight protein-tyrosine-phosphatase
1586 CAJZGS010000119.1 GCA_916048245.1_01586 CDS open 1796-2701 906_na     301_aa ddh Meso-diaminopimelate D-dehydrogenase
1587 CAJZGS010000119.1 GCA_916048245.1_01587 CDS open 2744-3619 876_na     291_aa lgt Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase
1588 CAJZGS010000120.1 GCA_916048245.1_01588 CDS open 1207-2436 1230_na     409_aa hflX GTPase HflX
1589 CAJZGS010000120.1 GCA_916048245.1_01589 CDS open 2467-3588 1122_na     373_aa hemH Ferrochelatase
1590 CAJZGS010000121.1 GCA_916048245.1_01590 CDS open 188-1363 1176_na     391_aa mnmA tRNA-specific 2-thiouridylase MnmA
1591 CAJZGS010000121.1 GCA_916048245.1_01591 CDS open 1487-3283 1797_na     598_aa hypothetical protein
1592 CAJZGS010000121.1 GCA_916048245.1_01592 CDS open 3280-4443 1164_na     387_aa cpoB_2 Cell division coordinator CpoB
1593 CAJZGS010000122.1 GCA_916048245.1_01593 CDS open 497-1633 1137_na     378_aa hypothetical protein
1594 CAJZGS010000122.1 GCA_916048245.1_01594 CDS open 1684-2694 1011_na     336_aa dusB tRNA-dihydrouridine synthase B
1595 CAJZGS010000122.1 GCA_916048245.1_01595 CDS open 2681-4387 1707_na     568_aa dauA C4-dicarboxylic acid transporter DauA
1596 CAJZGS010000123.1 GCA_916048245.1_01596 CDS open 191-1045 855_na     284_aa btuD_4 Vitamin B12 import ATP-binding protein BtuD
1597 CAJZGS010000123.1 GCA_916048245.1_01597 CDS open 1054-1836 783_na     260_aa hypothetical protein
1598 CAJZGS010000123.1 GCA_916048245.1_01598 CDS open 1842-2186 345_na     114_aa ytrA HTH-type transcriptional repressor YtrA
1599 CAJZGS010000123.1 GCA_916048245.1_01599 CDS open 2300-3517 1218_na     405_aa hypothetical protein
1600 CAJZGS010000123.1 GCA_916048245.1_01600 CDS open 3510-4292 783_na     260_aa ykoT putative glycosyltransferase YkoT
1601 CAJZGS010000124.1 GCA_916048245.1_01601 CDS open 423-722 300_na     99_aa hypothetical protein
1602 CAJZGS010000124.1 GCA_916048245.1_01602 CDS open 853-1332 480_na     159_aa hypothetical protein
1603 CAJZGS010000124.1 GCA_916048245.1_01603 CDS open 1348-2325 978_na     325_aa putative protein
1604 CAJZGS010000124.1 GCA_916048245.1_01604 CDS open 2467-2595 129_na     42_aa hypothetical protein
1605 CAJZGS010000124.1 GCA_916048245.1_01605 CDS open 2624-3292 669_na     222_aa rpe Ribulose-phosphate 3-epimerase
1606 CAJZGS010000125.1 GCA_916048245.1_01606 CDS open 40-3015 2976_na     991_aa lptD_2 LPS-assembly protein LptD
1607 CAJZGS010000125.1 GCA_916048245.1_01607 CDS open 3426-4184 759_na     252_aa hypothetical protein
1608 CAJZGS010000126.1 GCA_916048245.1_01608 CDS open 42-1538 1497_na     498_aa hypothetical protein
1609 CAJZGS010000126.1 GCA_916048245.1_01609 CDS open 1646-3703 2058_na     685_aa htpG Chaperone protein HtpG
1610 CAJZGS010000127.1 GCA_916048245.1_01610 CDS open 1990-2598 609_na     202_aa hypothetical protein
1611 CAJZGS010000127.1 GCA_916048245.1_01611 CDS open 2622-3848 1227_na     408_aa sdaB L-serine dehydratase 2
1612 CAJZGS010000128.1 GCA_916048245.1_01612 CDS open 166-1128 963_na     320_aa glkA Glucokinase
1613 CAJZGS010000128.1 GCA_916048245.1_01613 CDS open 1370-1912 543_na     180_aa nudC NADH pyrophosphatase
1614 CAJZGS010000128.1 GCA_916048245.1_01614 CDS open 1913-2827 915_na     304_aa hypothetical protein
1615 CAJZGS010000128.1 GCA_916048245.1_01615 CDS open 3086-3391 306_na     101_aa hypothetical protein
1616 CAJZGS010000129.1 GCA_916048245.1_01616 CDS open 93-692 600_na     199_aa hypothetical protein
1617 CAJZGS010000129.1 GCA_916048245.1_01617 CDS open 932-1567 636_na     211_aa hypothetical protein
1618 CAJZGS010000129.1 GCA_916048245.1_01618 CDS open 1615-1830 216_na     71_aa hypothetical protein
1619 CAJZGS010000129.1 GCA_916048245.1_01619 CDS open 1977-3434 1458_na     485_aa pepD_2 Cytosol non-specific dipeptidase
1620 CAJZGS010000130.1 GCA_916048245.1_01620 CDS open 667-1152 486_na     161_aa hypothetical protein
1621 CAJZGS010000130.1 GCA_916048245.1_01621 CDS open 1387-2520 1134_na     377_aa Outer membrane protein 41
1622 CAJZGS010000130.1 GCA_916048245.1_01622 CDS open 2565-3713 1149_na     382_aa Outer membrane protein 40
1623 CAJZGS010000131.1 GCA_916048245.1_01623 CDS open 260-1030 771_na     256_aa hypothetical protein
1624 CAJZGS010000131.1 GCA_916048245.1_01624 CDS open 2484-2597 114_na     37_aa hypothetical protein
1625 CAJZGS010000131.1 GCA_916048245.1_01625 CDS open 2767-3039 273_na     90_aa hypothetical protein
1626 CAJZGS010000132.1 GCA_916048245.1_01626 CDS open 269-1480 1212_na     403_aa hypothetical protein
1627 CAJZGS010000132.1 GCA_916048245.1_01627 CDS open 1772-2863 1092_na     363_aa cpdA_2 3%2C5-cyclic adenosine monophosphate phosphodiesterase CpdA
1628 CAJZGS010000133.1 GCA_916048245.1_01628 CDS open 265-2151 1887_na     628_aa lepA Elongation factor 4
1629 CAJZGS010000133.1 GCA_916048245.1_01629 CDS open 2653-3153 501_na     166_aa hypothetical protein
1630 CAJZGS010000134.1 GCA_916048245.1_01630 CDS open 247-1404 1158_na     385_aa resA_2 Thiol-disulfide oxidoreductase ResA
1631 CAJZGS010000134.1 GCA_916048245.1_01631 CDS open 1482-1598 117_na     38_aa hypothetical protein
1632 CAJZGS010000134.1 GCA_916048245.1_01632 CDS open 1664-2110 447_na     148_aa putative protein
1633 CAJZGS010000134.1 GCA_916048245.1_01633 CDS open 2362-2886 525_na     174_aa kefF Glutathione-regulated potassium-efflux system ancillary protein KefF
1634 CAJZGS010000134.1 GCA_916048245.1_01634 CDS open 3059-3424 366_na     121_aa asnS Asparagine--tRNA ligase
1635 CAJZGS010000135.1 GCA_916048245.1_01635 CDS open 346-966 621_na     206_aa kdsD Arabinose 5-phosphate isomerase KdsD
1636 CAJZGS010000135.1 GCA_916048245.1_01636 CDS open 1156-2976 1821_na     606_aa deaD ATP-dependent RNA helicase DeaD
1637 CAJZGS010000136.1 tRNA open 212-286 tRNA-Arg(ccg)
1638 CAJZGS010000136.1 GCA_916048245.1_01638 CDS open 443-1510 1068_na     355_aa mro Aldose 1-epimerase
1639 CAJZGS010000136.1 GCA_916048245.1_01639 CDS open 1553-2830 1278_na     425_aa fucP L-fucose-proton symporter
1640 CAJZGS010000137.1 GCA_916048245.1_01640 CDS open 568-2880 2313_na     770_aa hypothetical protein
1641 CAJZGS010000138.1 GCA_916048245.1_01641 CDS open 341-2596 2256_na     751_aa kefB Glutathione-regulated potassium-efflux system protein KefB
1642 CAJZGS010000139.1 GCA_916048245.1_01642 CDS open 124-588 465_na     154_aa hypothetical protein
1643 CAJZGS010000139.1 GCA_916048245.1_01643 CDS open 832-1464 633_na     210_aa hypothetical protein
1644 CAJZGS010000139.1 GCA_916048245.1_01644 CDS open 1544-2902 1359_na     452_aa hypothetical protein
1645 CAJZGS010000140.1 GCA_916048245.1_01645 CDS open 103-1053 951_na     316_aa hypothetical protein
1646 CAJZGS010000140.1 GCA_916048245.1_01646 CDS open 1040-2722 1683_na     560_aa nrdZ Vitamin B12-dependent ribonucleoside-diphosphate reductase
1647 CAJZGS010000141.1 GCA_916048245.1_01647 CDS open 146-679 534_na     177_aa aroK Shikimate kinase
1648 CAJZGS010000141.1 GCA_916048245.1_01648 CDS open 691-2748 2058_na     685_aa rny Ribonuclease Y
1649 CAJZGS010000142.1 GCA_916048245.1_01649 CDS open 525-2162 1638_na     545_aa groL 60 kDa chaperonin
1650 CAJZGS010000142.1 GCA_916048245.1_01650 CDS open 2198-2467 270_na     89_aa groS 10 kDa chaperonin
1651 CAJZGS010000143.1 GCA_916048245.1_01651 CDS open 126-1193 1068_na     355_aa hypothetical protein
1652 CAJZGS010000143.1 GCA_916048245.1_01652 CDS open 1304-2305 1002_na     333_aa mdh Malate dehydrogenase
1653 CAJZGS010000144.1 tRNA open 77-150 tRNA-Lys(ctt)
1654 CAJZGS010000144.1 GCA_916048245.1_01654 CDS open 596-1225 630_na     209_aa rnhA Ribonuclease H
1655 CAJZGS010000144.1 GCA_916048245.1_01655 CDS open 2139-2378 240_na     79_aa hypothetical protein