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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Veillonella atypica (GCA_959022565.1)

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PROKKA Annotations for GCA_959022565.1
Genome Selected: Veillonella atypica
ContigsBases CDSrRNA tmRNAtRNA
145 1,732,487 1594 0 1 26
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Annotation Table [page:4]    |    Number of Records Found: 1639 [4 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
1501 CAUEZJ010000106.1 GCA_959022565.1_01501 CDS open 2862-4178 1317_na     438_aa ttuB Putative tartrate transporter
1502 CAUEZJ010000106.1 GCA_959022565.1_01502 CDS open 4540-5115 576_na     191_aa ydeA putative protease YdeA
1503 CAUEZJ010000107.1 GCA_959022565.1_01503 CDS open 80-298 219_na     72_aa hypothetical protein
1504 CAUEZJ010000107.1 GCA_959022565.1_01504 CDS open 400-660 261_na     86_aa hypothetical protein
1505 CAUEZJ010000107.1 GCA_959022565.1_01505 CDS open 676-2811 2136_na     711_aa ctpC Manganese-exporting P-type ATPase
1506 CAUEZJ010000107.1 GCA_959022565.1_01506 CDS open 2953-3360 408_na     135_aa hypothetical protein
1507 CAUEZJ010000107.1 GCA_959022565.1_01507 CDS open 3353-4192 840_na     279_aa hypothetical protein
1508 CAUEZJ010000107.1 GCA_959022565.1_01508 CDS open 4249-4926 678_na     225_aa hypothetical protein
1509 CAUEZJ010000107.1 GCA_959022565.1_01509 CDS open 4998-5141 144_na     47_aa hypothetical protein
1510 CAUEZJ010000108.1 tRNA open 1707-1783 tRNA-Arg(cct)
1511 CAUEZJ010000108.1 GCA_959022565.1_01511 CDS open 1888-2769 882_na     293_aa hypothetical protein
1512 CAUEZJ010000108.1 GCA_959022565.1_01512 CDS open 2898-3182 285_na     94_aa hypothetical protein
1513 CAUEZJ010000108.1 GCA_959022565.1_01513 CDS open 3273-4658 1386_na     461_aa dinB_2 DNA polymerase IV
1514 CAUEZJ010000108.1 GCA_959022565.1_01514 CDS open 4676-5020 345_na     114_aa hypothetical protein
1515 CAUEZJ010000109.1 GCA_959022565.1_01515 CDS open 188-1579 1392_na     463_aa tcyP L-cystine uptake protein TcyP
1516 CAUEZJ010000109.1 GCA_959022565.1_01516 CDS open 1784-2512 729_na     242_aa lutC Lactate utilization protein C
1517 CAUEZJ010000109.1 GCA_959022565.1_01517 CDS open 2512-3957 1446_na     481_aa lutB Lactate utilization protein B
1518 CAUEZJ010000109.1 GCA_959022565.1_01518 CDS open 3970-4707 738_na     245_aa lutA Lactate utilization protein A
1519 CAUEZJ010000110.1 GCA_959022565.1_01519 CDS open 67-1215 1149_na     382_aa braC Leucine-%2C isoleucine-%2C valine-%2C threonine-%2C and alanine-binding protein
1520 CAUEZJ010000110.1 GCA_959022565.1_01520 CDS open 1232-2113 882_na     293_aa livH High-affinity branched-chain amino acid transport system permease protein LivH
1521 CAUEZJ010000110.1 GCA_959022565.1_01521 CDS open 2113-3123 1011_na     336_aa hypothetical protein
1522 CAUEZJ010000110.1 GCA_959022565.1_01522 CDS open 3136-3897 762_na     253_aa lptB_2 Lipopolysaccharide export system ATP-binding protein LptB
1523 CAUEZJ010000110.1 GCA_959022565.1_01523 CDS open 3899-4609 711_na     236_aa livF High-affinity branched-chain amino acid transport ATP-binding protein LivF
1524 CAUEZJ010000111.1 GCA_959022565.1_01524 CDS open 444-815 372_na     123_aa hypothetical protein
1525 CAUEZJ010000111.1 GCA_959022565.1_01525 CDS open 1042-3507 2466_na     821_aa gyrA DNA gyrase subunit A
1526 CAUEZJ010000111.1 GCA_959022565.1_01526 CDS open 3614-4558 945_na     314_aa hypothetical protein
1527 CAUEZJ010000112.1 GCA_959022565.1_01527 CDS open 101-1414 1314_na     437_aa hypothetical protein
1528 CAUEZJ010000112.1 GCA_959022565.1_01528 CDS open 1424-2461 1038_na     345_aa cobT_3 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
1529 CAUEZJ010000112.1 GCA_959022565.1_01529 CDS open 2463-3086 624_na     207_aa nudL putative Nudix hydrolase NudL
1530 CAUEZJ010000112.1 GCA_959022565.1_01530 CDS open 3236-4558 1323_na     440_aa gltT Protonsodium-glutamate symport protein
1531 CAUEZJ010000113.1 GCA_959022565.1_01531 CDS open 54-572 519_na     172_aa hypothetical protein
1532 CAUEZJ010000113.1 GCA_959022565.1_01532 CDS open 654-2213 1560_na     519_aa hypothetical protein
1533 CAUEZJ010000113.1 GCA_959022565.1_01533 CDS open 2362-3534 1173_na     390_aa dhaT 1%2C3-propanediol dehydrogenase
1534 CAUEZJ010000113.1 GCA_959022565.1_01534 CDS open 3559-4389 831_na     276_aa hypothetical protein
1535 CAUEZJ010000114.1 GCA_959022565.1_01535 CDS open 180-926 747_na     248_aa larE Pyridinium-3%2C5-bisthiocarboxylic acid mononucleotide synthase
1536 CAUEZJ010000114.1 GCA_959022565.1_01536 CDS open 923-1678 756_na     251_aa larB Pyridinium-3%2C5-biscarboxylic acid mononucleotide synthase
1537 CAUEZJ010000114.1 GCA_959022565.1_01537 CDS open 1675-2964 1290_na     429_aa larC Pyridinium-3%2C5-bisthiocarboxylic acid mononucleotide nickel insertion protein
1538 CAUEZJ010000114.1 GCA_959022565.1_01538 CDS open 3020-4297 1278_na     425_aa larA_2 Lactate racemase
1539 CAUEZJ010000115.1 GCA_959022565.1_01539 CDS open 34-252 219_na     72_aa hypothetical protein
1540 CAUEZJ010000115.1 GCA_959022565.1_01540 CDS open 295-1584 1290_na     429_aa hom Homoserine dehydrogenase
1541 CAUEZJ010000115.1 GCA_959022565.1_01541 CDS open 1589-2515 927_na     308_aa thrB Homoserine kinase
1542 CAUEZJ010000115.1 GCA_959022565.1_01542 CDS open 2562-3422 861_na     286_aa htpX Protease HtpX
1543 CAUEZJ010000115.1 GCA_959022565.1_01543 CDS open 3441-3848 408_na     135_aa ndk Nucleoside diphosphate kinase
1544 CAUEZJ010000116.1 GCA_959022565.1_01544 CDS open 266-1033 768_na     255_aa lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2%2C3-dione isomerase
1545 CAUEZJ010000116.1 GCA_959022565.1_01545 CDS open 1140-1922 783_na     260_aa Protein-ADP-ribose hydrolase
1546 CAUEZJ010000116.1 GCA_959022565.1_01546 CDS open 1894-2739 846_na     281_aa Protein ADP-ribosyltransferase
1547 CAUEZJ010000116.1 GCA_959022565.1_01547 CDS open 2763-3260 498_na     165_aa ogt Methylated-DNA--protein-cysteine methyltransferase
1548 CAUEZJ010000116.1 GCA_959022565.1_01548 CDS open 3386-4051 666_na     221_aa yisK putative protein YisK
1549 CAUEZJ010000117.1 GCA_959022565.1_01549 CDS open 78-299 222_na     73_aa hypothetical protein
1550 CAUEZJ010000117.1 GCA_959022565.1_01550 CDS open 311-523 213_na     70_aa hypothetical protein
1551 CAUEZJ010000117.1 GCA_959022565.1_01551 CDS open 566-1357 792_na     263_aa yafV Omega-amidase YafV
1552 CAUEZJ010000117.1 GCA_959022565.1_01552 CDS open 1534-2340 807_na     268_aa pgaB Poly-beta-1%2C6-N-acetyl-D-glucosamine N-deacetylase
1553 CAUEZJ010000117.1 GCA_959022565.1_01553 CDS open 2352-3290 939_na     312_aa hypothetical protein
1554 CAUEZJ010000117.1 GCA_959022565.1_01554 CDS open 3299-4240 942_na     313_aa hypothetical protein
1555 CAUEZJ010000118.1 GCA_959022565.1_01555 CDS open 86-187 102_na     33_aa hypothetical protein
1556 CAUEZJ010000118.1 GCA_959022565.1_01556 CDS open 819-1526 708_na     235_aa hypothetical protein
1557 CAUEZJ010000118.1 GCA_959022565.1_01557 CDS open 2387-2488 102_na     33_aa hypothetical protein
1558 CAUEZJ010000119.1 GCA_959022565.1_01558 CDS open 81-1445 1365_na     454_aa hypothetical protein
1559 CAUEZJ010000119.1 GCA_959022565.1_01559 CDS open 1461-2555 1095_na     364_aa wbgU UDP-N-acetylglucosamine 4-epimerase
1560 CAUEZJ010000119.1 GCA_959022565.1_01560 CDS open 2556-3722 1167_na     388_aa ugd UDP-glucose 6-dehydrogenase
1561 CAUEZJ010000120.1 GCA_959022565.1_01561 CDS open 43-192 150_na     49_aa hypothetical protein
1562 CAUEZJ010000120.1 GCA_959022565.1_01562 CDS open 283-1026 744_na     247_aa hypothetical protein
1563 CAUEZJ010000120.1 GCA_959022565.1_01563 CDS open 1038-1952 915_na     304_aa hypothetical protein
1564 CAUEZJ010000120.1 GCA_959022565.1_01564 CDS open 2102-3040 939_na     312_aa hypothetical protein
1565 CAUEZJ010000120.1 GCA_959022565.1_01565 CDS open 3189-3938 750_na     249_aa COQ5 2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase%2C mitochondrial
1566 CAUEZJ010000121.1 GCA_959022565.1_01566 CDS open 79-2985 2907_na     968_aa hypothetical protein
1567 CAUEZJ010000121.1 GCA_959022565.1_01567 CDS open 3082-4029 948_na     315_aa gltX1 Glutamate--tRNA ligase 1
1568 CAUEZJ010000122.1 GCA_959022565.1_01568 CDS open 126-722 597_na     198_aa tag DNA-3-methyladenine glycosylase 1
1569 CAUEZJ010000122.1 GCA_959022565.1_01569 CDS open 851-1567 717_na     238_aa ydfK putative membrane protein YdfK
1570 CAUEZJ010000122.1 GCA_959022565.1_01570 CDS open 1739-2923 1185_na     394_aa ybjJ Inner membrane protein YbjJ
1571 CAUEZJ010000122.1 GCA_959022565.1_01571 CDS open 3009-3995 987_na     328_aa guaC GMP reductase
1572 CAUEZJ010000123.1 misc_RNA open 62-177 FMN
1573 CAUEZJ010000123.1 GCA_959022565.1_01573 CDS open 253-1470 1218_na     405_aa ribD Riboflavin biosynthesis protein RibD
1574 CAUEZJ010000123.1 GCA_959022565.1_01574 CDS open 1451-2107 657_na     218_aa ribE Riboflavin synthase
1575 CAUEZJ010000123.1 GCA_959022565.1_01575 CDS open 2125-3327 1203_na     400_aa ribBA Riboflavin biosynthesis protein RibBA
1576 CAUEZJ010000123.1 GCA_959022565.1_01576 CDS open 3381-3842 462_na     153_aa ribH 6%2C7-dimethyl-8-ribityllumazine synthase
1577 CAUEZJ010000124.1 GCA_959022565.1_01577 CDS open 46-429 384_na     127_aa hypothetical protein
1578 CAUEZJ010000124.1 GCA_959022565.1_01578 CDS open 564-941 378_na     125_aa crcB Putative fluoride ion transporter CrcB
1579 CAUEZJ010000124.1 GCA_959022565.1_01579 CDS open 1041-2015 975_na     324_aa cinA_2 Putative competence-damage inducible protein
1580 CAUEZJ010000124.1 GCA_959022565.1_01580 CDS open 2176-3870 1695_na     564_aa hypothetical protein
1581 CAUEZJ010000125.1 GCA_959022565.1_01581 CDS open 71-1225 1155_na     384_aa ychF Ribosome-binding ATPase YchF
1582 CAUEZJ010000125.1 GCA_959022565.1_01582 CDS open 1537-2709 1173_na     390_aa cfa Cyclopropane-fatty-acyl-phospholipid synthase
1583 CAUEZJ010000125.1 GCA_959022565.1_01583 CDS open 2843-3817 975_na     324_aa ddh Meso-diaminopimelate D-dehydrogenase
1584 CAUEZJ010000126.1 GCA_959022565.1_01584 CDS open 184-2259 2076_na     691_aa fusA_2 Elongation factor G
1585 CAUEZJ010000126.1 GCA_959022565.1_01585 CDS open 2275-2745 471_na     156_aa rpsG 30S ribosomal protein S7
1586 CAUEZJ010000126.1 GCA_959022565.1_01586 CDS open 2798-3172 375_na     124_aa rpsL 30S ribosomal protein S12
1587 CAUEZJ010000126.1 GCA_959022565.1_01587 CDS open 3249-3494 246_na     81_aa hypothetical protein
1588 CAUEZJ010000127.1 GCA_959022565.1_01588 CDS open 56-745 690_na     229_aa regX3 Sensory transduction protein regX3
1589 CAUEZJ010000127.1 GCA_959022565.1_01589 CDS open 738-1913 1176_na     391_aa sasA Adaptive-response sensory-kinase SasA
1590 CAUEZJ010000127.1 GCA_959022565.1_01590 CDS open 2196-3548 1353_na     450_aa oadA Oxaloacetate decarboxylase alpha chain
1591 CAUEZJ010000128.1 GCA_959022565.1_01591 CDS open 363-1514 1152_na     383_aa hypothetical protein
1592 CAUEZJ010000128.1 GCA_959022565.1_01592 CDS open 2035-3330 1296_na     431_aa purB Adenylosuccinate lyase
1593 CAUEZJ010000129.1 GCA_959022565.1_01593 CDS open 842-976 135_na     44_aa hypothetical protein
1594 CAUEZJ010000129.1 GCA_959022565.1_01594 CDS open 1158-1646 489_na     162_aa hypothetical protein
1595 CAUEZJ010000129.1 GCA_959022565.1_01595 CDS open 1777-3072 1296_na     431_aa hypothetical protein
1596 CAUEZJ010000129.1 GCA_959022565.1_01596 CDS open 3241-3375 135_na     44_aa hypothetical protein
1597 CAUEZJ010000130.1 GCA_959022565.1_01597 CDS open 30-566 537_na     178_aa hypothetical protein
1598 CAUEZJ010000130.1 GCA_959022565.1_01598 CDS open 576-1313 738_na     245_aa Putative TrmH family tRNArRNA methyltransferase
1599 CAUEZJ010000130.1 GCA_959022565.1_01599 CDS open 1306-1791 486_na     161_aa mrnC Mini-ribonuclease 3
1600 CAUEZJ010000130.1 GCA_959022565.1_01600 CDS open 1781-3229 1449_na     482_aa cysS Cysteine--tRNA ligase
1601 CAUEZJ010000130.1 misc_RNA open 3279-3484 T-box
1602 CAUEZJ010000131.1 GCA_959022565.1_01602 CDS open 26-979 954_na     317_aa NADH:quinone reductase
1603 CAUEZJ010000131.1 GCA_959022565.1_01603 CDS open 991-1539 549_na     182_aa yrdA Protein YrdA
1604 CAUEZJ010000131.1 GCA_959022565.1_01604 CDS open 1674-2906 1233_na     410_aa clcA_2 H(+)Cl(-) exchange transporter ClcA
1605 CAUEZJ010000131.1 GCA_959022565.1_01605 CDS open 2917-3414 498_na     165_aa nrdG Anaerobic ribonucleoside-triphosphate reductase-activating protein
1606 CAUEZJ010000132.1 GCA_959022565.1_01606 CDS open 298-876 579_na     192_aa cobU Bifunctional adenosylcobalamin biosynthesis protein CobU
1607 CAUEZJ010000132.1 GCA_959022565.1_01607 CDS open 869-2395 1527_na     508_aa cobQ Cobyric acid synthase
1608 CAUEZJ010000133.1 GCA_959022565.1_01608 CDS open 148-945 798_na     265_aa hypothetical protein
1609 CAUEZJ010000133.1 GCA_959022565.1_01609 CDS open 972-2033 1062_na     353_aa hypothetical protein
1610 CAUEZJ010000133.1 GCA_959022565.1_01610 CDS open 2062-2481 420_na     139_aa hypothetical protein
1611 CAUEZJ010000133.1 GCA_959022565.1_01611 CDS open 2474-2833 360_na     119_aa hypothetical protein
1612 CAUEZJ010000134.1 GCA_959022565.1_01612 CDS open 669-1256 588_na     195_aa rpsD 30S ribosomal protein S4
1613 CAUEZJ010000134.1 GCA_959022565.1_01613 CDS open 1590-2489 900_na     299_aa hdfR_3 HTH-type transcriptional regulator HdfR
1614 CAUEZJ010000134.1 GCA_959022565.1_01614 CDS open 2614-2937 324_na     107_aa hypothetical protein
1615 CAUEZJ010000135.1 GCA_959022565.1_01615 CDS open 373-1698 1326_na     441_aa hypothetical protein
1616 CAUEZJ010000135.1 GCA_959022565.1_01616 CDS open 1992-3110 1119_na     372_aa hypothetical protein
1617 CAUEZJ010000136.1 GCA_959022565.1_01617 CDS open 59-877 819_na     272_aa hypothetical protein
1618 CAUEZJ010000136.1 GCA_959022565.1_01618 CDS open 927-2630 1704_na     567_aa pglF UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase
1619 CAUEZJ010000137.1 GCA_959022565.1_01619 CDS open 413-2314 1902_na     633_aa hypothetical protein
1620 CAUEZJ010000137.1 GCA_959022565.1_01620 CDS open 2476-2745 270_na     89_aa yqeY putative protein YqeY
1621 CAUEZJ010000138.1 GCA_959022565.1_01621 CDS open 58-1890 1833_na     610_aa hypothetical protein
1622 CAUEZJ010000138.1 GCA_959022565.1_01622 CDS open 1928-2383 456_na     151_aa hypothetical protein
1623 CAUEZJ010000138.1 tRNA open 2451-2539 tRNA-Leu(taa)
1624 CAUEZJ010000138.1 tRNA open 2556-2630 tRNA-Cys(gca)
1625 CAUEZJ010000138.1 tRNA open 2643-2717 tRNA-Gly(gcc)
1626 CAUEZJ010000139.1 GCA_959022565.1_01626 CDS open 59-250 192_na     63_aa hypothetical protein
1627 CAUEZJ010000139.1 GCA_959022565.1_01627 CDS open 528-1550 1023_na     340_aa ilvK Branched-chain-amino-acid aminotransferase 2
1628 CAUEZJ010000139.1 GCA_959022565.1_01628 CDS open 1594-2502 909_na     302_aa hypothetical protein
1629 CAUEZJ010000140.1 GCA_959022565.1_01629 CDS open 1409-2323 915_na     304_aa xerC_1 Tyrosine recombinase XerC
1630 CAUEZJ010000141.1 GCA_959022565.1_01630 CDS open 461-775 315_na     104_aa hypothetical protein
1631 CAUEZJ010000141.1 GCA_959022565.1_01631 CDS open 793-1389 597_na     198_aa hypothetical protein
1632 CAUEZJ010000142.1 GCA_959022565.1_01632 CDS open 48-497 450_na     149_aa dut Deoxyuridine 5-triphosphate nucleotidohydrolase
1633 CAUEZJ010000142.1 GCA_959022565.1_01633 CDS open 508-2577 2070_na     689_aa pnp Polyribonucleotide nucleotidyltransferase
1634 CAUEZJ010000143.1 GCA_959022565.1_01634 CDS open 271-1281 1011_na     336_aa xerC_2 Tyrosine recombinase XerC
1635 CAUEZJ010000143.1 GCA_959022565.1_01635 CDS open 1357-1659 303_na     100_aa yneA Cell division suppressor protein YneA
1636 CAUEZJ010000143.1 GCA_959022565.1_01636 CDS open 1872-2549 678_na     225_aa lexA LexA repressor
1637 CAUEZJ010000144.1 GCA_959022565.1_01637 CDS open 244-2397 2154_na     717_aa cooS1 Carbon monoxide dehydrogenase 1
1638 CAUEZJ010000145.1 GCA_959022565.1_01638 CDS open 137-2047 1911_na     636_aa thrZ Threonine--tRNA ligase 2
1639 CAUEZJ010000145.1 misc_RNA open 2122-2351 T-box