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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Neisseria subflava (GCA_963395055.1)

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PROKKA Annotations for GCA_963395055.1
Genome Selected: Neisseria subflava
ContigsBases CDSrRNA tmRNAtRNA
60 2,137,566 2042 3 1 54
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Annotation Table [page:5]    |    Number of Records Found: 2151 [5 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2001 CAUJPU010000017.1 GCA_963395055.1_02001 CDS open 660-824 165_na     54_aa hypothetical protein
2002 CAUJPU010000017.1 GCA_963395055.1_02002 CDS open 861-1325 465_na     154_aa hypothetical protein
2003 CAUJPU010000017.1 GCA_963395055.1_02003 CDS open 1601-2464 864_na     287_aa hypothetical protein
2004 CAUJPU010000017.1 GCA_963395055.1_02004 CDS open 2488-2613 126_na     41_aa hypothetical protein
2005 CAUJPU010000017.1 GCA_963395055.1_02005 CDS open 2679-3182 504_na     167_aa hypothetical protein
2006 CAUJPU010000017.1 GCA_963395055.1_02006 CDS open 3396-4868 1473_na     490_aa pykA Pyruvate kinase II
2007 CAUJPU010000017.1 GCA_963395055.1_02007 CDS open 5068-6483 1416_na     471_aa Putative outer membrane protein
2008 CAUJPU010000017.1 GCA_963395055.1_02008 CDS open 6795-8060 1266_na     421_aa hypothetical protein
2009 CAUJPU010000017.1 GCA_963395055.1_02009 CDS open 8295-8798 504_na     167_aa def1 Peptide deformylase 1
2010 CAUJPU010000017.1 GCA_963395055.1_02010 CDS open 8934-9860 927_na     308_aa fmt_2 Methionyl-tRNA formyltransferase
2011 CAUJPU010000017.1 GCA_963395055.1_02011 CDS open 9894-10412 519_na     172_aa ymdB O-acetyl-ADP-ribose deacetylase
2012 CAUJPU010000017.1 GCA_963395055.1_02012 CDS open 10459-11718 1260_na     419_aa rsmB_2 Ribosomal RNA small subunit methyltransferase B
2013 CAUJPU010000017.1 GCA_963395055.1_02013 CDS open 11684-12277 594_na     197_aa hypothetical protein
2014 CAUJPU010000017.1 GCA_963395055.1_02014 CDS open 12281-14407 2127_na     708_aa sasA_3 Adaptive-response sensory-kinase SasA
2015 CAUJPU010000017.1 GCA_963395055.1_02015 CDS open 14394-15668 1275_na     424_aa zraR Transcriptional regulatory protein ZraR
2016 CAUJPU010000017.1 GCA_963395055.1_02016 CDS open 16056-16184 129_na     42_aa hypothetical protein
2017 CAUJPU010000017.1 GCA_963395055.1_02017 CDS open 16132-16290 159_na     52_aa hypothetical protein
2018 CAUJPU010000017.1 GCA_963395055.1_02018 CDS open 16383-17573 1191_na     396_aa hypothetical protein
2019 CAUJPU010000017.1 GCA_963395055.1_02019 CDS open 17598-18053 456_na     151_aa smg Protein Smg
2020 CAUJPU010000017.1 GCA_963395055.1_02020 CDS open 18127-20433 2307_na     768_aa topA DNA topoisomerase 1
2021 CAUJPU010000017.1 GCA_963395055.1_02021 CDS open 20582-21154 573_na     190_aa rsmD Ribosomal RNA small subunit methyltransferase D
2022 CAUJPU010000017.1 GCA_963395055.1_02022 CDS open 21277-21528 252_na     83_aa fdx_2 Ferredoxin
2023 CAUJPU010000017.1 tRNA open 21627-21710 tRNA-Tyr(gta)
2024 CAUJPU010000017.1 tRNA open 21742-21815 tRNA-Gly(tcc)
2025 CAUJPU010000017.1 tRNA open 21825-21899 tRNA-Thr(ggt)
2026 CAUJPU010000018.1 GCA_963395055.1_02026 CDS open 62-397 336_na     111_aa hypothetical protein
2027 CAUJPU010000018.1 GCA_963395055.1_02027 CDS open 765-2171 1407_na     468_aa putative protein
2028 CAUJPU010000018.1 GCA_963395055.1_02028 CDS open 2394-3608 1215_na     404_aa gltS Sodiumglutamate symporter
2029 CAUJPU010000018.1 GCA_963395055.1_02029 CDS open 3714-4736 1023_na     340_aa hypothetical protein
2030 CAUJPU010000018.1 GCA_963395055.1_02030 CDS open 4791-5786 996_na     331_aa hypothetical protein
2031 CAUJPU010000018.1 GCA_963395055.1_02031 CDS open 5978-6982 1005_na     334_aa pdxA 4-hydroxythreonine-4-phosphate dehydrogenase
2032 CAUJPU010000018.1 GCA_963395055.1_02032 CDS open 7139-7669 531_na     176_aa yceJ Cytochrome b561
2033 CAUJPU010000018.1 GCA_963395055.1_02033 CDS open 7903-9432 1530_na     509_aa hypothetical protein
2034 CAUJPU010000018.1 GCA_963395055.1_02034 CDS open 9547-10110 564_na     187_aa hpt Hypoxanthine phosphoribosyltransferase
2035 CAUJPU010000018.1 GCA_963395055.1_02035 CDS open 10169-10597 429_na     142_aa manX PTS system mannose-specific EIIAB component
2036 CAUJPU010000018.1 GCA_963395055.1_02036 CDS open 10642-10911 270_na     89_aa ptsH Phosphocarrier protein HPr
2037 CAUJPU010000018.1 GCA_963395055.1_02037 CDS open 10911-12674 1764_na     587_aa ptsI Phosphoenolpyruvate-protein phosphotransferase
2038 CAUJPU010000018.1 GCA_963395055.1_02038 CDS open 13192-14307 1116_na     371_aa putative protein
2039 CAUJPU010000018.1 GCA_963395055.1_02039 CDS open 14424-15470 1047_na     348_aa hmuU_2 Hemin transport system permease protein HmuU
2040 CAUJPU010000018.1 GCA_963395055.1_02040 CDS open 15481-16248 768_na     255_aa hmuV_2 Hemin import ATP-binding protein HmuV
2041 CAUJPU010000018.1 GCA_963395055.1_02041 CDS open 16418-16849 432_na     143_aa pazS Pseudoazurin
2042 CAUJPU010000018.1 GCA_963395055.1_02042 CDS open 16988-18250 1263_na     420_aa waaA 3-deoxy-D-manno-octulosonic acid transferase
2043 CAUJPU010000018.1 GCA_963395055.1_02043 CDS open 18318-18410 93_na     30_aa hypothetical protein
2044 CAUJPU010000019.1 GCA_963395055.1_02044 CDS open 227-844 618_na     205_aa hypothetical protein
2045 CAUJPU010000019.1 GCA_963395055.1_02045 CDS open 927-1751 825_na     274_aa uppP Undecaprenyl-diphosphatase
2046 CAUJPU010000019.1 GCA_963395055.1_02046 CDS open 1796-2437 642_na     213_aa dsbA_2 Thiol:disulfide interchange protein DsbA
2047 CAUJPU010000019.1 GCA_963395055.1_02047 CDS open 2449-3480 1032_na     343_aa hypothetical protein
2048 CAUJPU010000019.1 GCA_963395055.1_02048 CDS open 3635-5131 1497_na     498_aa comM Competence protein ComM
2049 CAUJPU010000019.1 GCA_963395055.1_02049 CDS open 5145-5465 321_na     106_aa ubiK Ubiquinone biosynthesis accessory factor UbiK
2050 CAUJPU010000019.1 GCA_963395055.1_02050 CDS open 5575-6744 1170_na     389_aa metK S-adenosylmethionine synthase
2051 CAUJPU010000019.1 misc_RNA open 6918-7028 SAM-I-IV-variant
2052 CAUJPU010000019.1 GCA_963395055.1_02052 CDS open 7137-8012 876_na     291_aa lpxL_2 Lipid A biosynthesis lauroyltransferase
2053 CAUJPU010000019.1 GCA_963395055.1_02053 CDS open 8264-11563 3300_na     1099_aa recC RecBCD enzyme subunit RecC
2054 CAUJPU010000019.1 GCA_963395055.1_02054 CDS open 11567-12073 507_na     168_aa hypothetical protein
2055 CAUJPU010000019.1 GCA_963395055.1_02055 CDS open 12188-13357 1170_na     389_aa lapB Lipopolysaccharide assembly protein B
2056 CAUJPU010000019.1 GCA_963395055.1_02056 CDS open 13383-13706 324_na     107_aa lapA Lipopolysaccharide assembly protein A
2057 CAUJPU010000019.1 GCA_963395055.1_02057 CDS open 13921-14919 999_na     332_aa ilvK Branched-chain-amino-acid aminotransferase 2
2058 CAUJPU010000019.1 GCA_963395055.1_02058 CDS open 15324-15977 654_na     217_aa IS1595 family transposase ISEco2
2059 CAUJPU010000019.1 GCA_963395055.1_02059 CDS open 16075-18144 2070_na     689_aa hypothetical protein
2060 CAUJPU010000020.1 GCA_963395055.1_02060 CDS open 22-159 138_na     45_aa tufA_2 Elongation factor Tu
2061 CAUJPU010000020.1 tRNA open 166-241 tRNA-Trp(cca)
2062 CAUJPU010000020.1 GCA_963395055.1_02062 CDS open 373-648 276_na     91_aa secE Protein translocase subunit SecE
2063 CAUJPU010000020.1 GCA_963395055.1_02063 CDS open 651-1184 534_na     177_aa nusG Transcription terminationantitermination protein NusG
2064 CAUJPU010000020.1 GCA_963395055.1_02064 CDS open 1289-1723 435_na     144_aa rplK 50S ribosomal protein L11
2065 CAUJPU010000020.1 GCA_963395055.1_02065 CDS open 1723-2418 696_na     231_aa rplA 50S ribosomal protein L1
2066 CAUJPU010000020.1 GCA_963395055.1_02066 CDS open 2642-3142 501_na     166_aa rplJ 50S ribosomal protein L10
2067 CAUJPU010000020.1 GCA_963395055.1_02067 CDS open 3201-3572 372_na     123_aa rplL 50S ribosomal protein L7L12
2068 CAUJPU010000020.1 GCA_963395055.1_02068 CDS open 3711-7940 4230_na     1409_aa rpoB DNA-directed RNA polymerase subunit beta
2069 CAUJPU010000020.1 GCA_963395055.1_02069 CDS open 8097-12272 4176_na     1391_aa rpoC DNA-directed RNA polymerase subunit beta
2070 CAUJPU010000020.1 GCA_963395055.1_02070 CDS open 12602-12973 372_na     123_aa rpsL 30S ribosomal protein S12
2071 CAUJPU010000020.1 GCA_963395055.1_02071 CDS open 13091-13561 471_na     156_aa rpsG 30S ribosomal protein S7
2072 CAUJPU010000020.1 GCA_963395055.1_02072 CDS open 13580-15685 2106_na     701_aa fusA Elongation factor G
2073 CAUJPU010000021.1 GCA_963395055.1_02073 CDS open 380-1393 1014_na     337_aa ilvC Ketol-acid reductoisomerase (NADP(+))
2074 CAUJPU010000021.1 GCA_963395055.1_02074 CDS open 1455-1748 294_na     97_aa hypothetical protein
2075 CAUJPU010000021.1 GCA_963395055.1_02075 CDS open 1815-2306 492_na     163_aa ilvH Acetolactate synthase isozyme 3 small subunit
2076 CAUJPU010000021.1 GCA_963395055.1_02076 CDS open 2317-4044 1728_na     575_aa ilvI Acetolactate synthase isozyme 3 large subunit
2077 CAUJPU010000021.1 tRNA open 4434-4518 tRNA-Leu(caa)
2078 CAUJPU010000021.1 GCA_963395055.1_02078 CDS open 4802-5464 663_na     220_aa hypothetical protein
2079 CAUJPU010000021.1 GCA_963395055.1_02079 CDS open 5547-6200 654_na     217_aa hisG ATP phosphoribosyltransferase
2080 CAUJPU010000021.1 GCA_963395055.1_02080 CDS open 6249-6974 726_na     241_aa frp NADPH-flavin oxidoreductase
2081 CAUJPU010000021.1 GCA_963395055.1_02081 CDS open 7046-8338 1293_na     430_aa hisD Histidinol dehydrogenase
2082 CAUJPU010000021.1 GCA_963395055.1_02082 CDS open 8446-9327 882_na     293_aa tyrC Cyclohexadienyl dehydrogenase
2083 CAUJPU010000021.1 GCA_963395055.1_02083 CDS open 9623-10117 495_na     164_aa mprA Transcriptional repressor MprA
2084 CAUJPU010000021.1 GCA_963395055.1_02084 CDS open 10167-11573 1407_na     468_aa oprM_2 Outer membrane protein OprM
2085 CAUJPU010000021.1 GCA_963395055.1_02085 CDS open 11798-12988 1191_na     396_aa farA Fatty acid resistance protein FarA
2086 CAUJPU010000021.1 GCA_963395055.1_02086 CDS open 13090-14616 1527_na     508_aa farB Fatty acid resistance protein FarB
2087 CAUJPU010000021.1 GCA_963395055.1_02087 CDS open 14659-15576 918_na     305_aa thrB Homoserine kinase
2088 CAUJPU010000022.1 GCA_963395055.1_02088 CDS open 236-739 504_na     167_aa hypothetical protein
2089 CAUJPU010000022.1 GCA_963395055.1_02089 CDS open 1161-2609 1449_na     482_aa cysG Siroheme synthase
2090 CAUJPU010000022.1 GCA_963395055.1_02090 CDS open 2566-3399 834_na     277_aa cysH Thioredoxin-dependent 5-adenylylsulfate reductase
2091 CAUJPU010000022.1 GCA_963395055.1_02091 CDS open 3543-4463 921_na     306_aa cysD Sulfate adenylyltransferase subunit 2
2092 CAUJPU010000022.1 GCA_963395055.1_02092 CDS open 4671-6092 1422_na     473_aa cysN Sulfate adenylyltransferase subunit 1
2093 CAUJPU010000022.1 GCA_963395055.1_02093 CDS open 6124-6360 237_na     78_aa hypothetical protein
2094 CAUJPU010000022.1 GCA_963395055.1_02094 CDS open 6496-8277 1782_na     593_aa cysJ Sulfite reductase [NADPH] flavoprotein alpha-component
2095 CAUJPU010000022.1 GCA_963395055.1_02095 CDS open 8389-10155 1767_na     588_aa cysI_2 Sulfite reductase [NADPH] hemoprotein beta-component
2096 CAUJPU010000023.1 GCA_963395055.1_02096 CDS open 111-1208 1098_na     365_aa hypothetical protein
2097 CAUJPU010000023.1 GCA_963395055.1_02097 CDS open 1503-2117 615_na     204_aa hypothetical protein
2098 CAUJPU010000023.1 GCA_963395055.1_02098 CDS open 2429-3121 693_na     230_aa ssuB Aliphatic sulfonates import ATP-binding protein SsuB
2099 CAUJPU010000023.1 GCA_963395055.1_02099 CDS open 3121-3918 798_na     265_aa nrtB Nitrate import permease protein NrtB
2100 CAUJPU010000023.1 GCA_963395055.1_02100 CDS open 4099-4593 495_na     164_aa hypothetical protein
2101 CAUJPU010000023.1 GCA_963395055.1_02101 CDS open 4901-5878 978_na     325_aa hypothetical protein
2102 CAUJPU010000023.1 GCA_963395055.1_02102 CDS open 5937-7856 1920_na     639_aa hypothetical protein
2103 CAUJPU010000023.1 GCA_963395055.1_02103 CDS open 8180-9568 1389_na     462_aa fumC Fumarate hydratase class II
2104 CAUJPU010000024.1 GCA_963395055.1_02104 CDS open 3-599 597_na     198_aa hypothetical protein
2105 CAUJPU010000024.1 GCA_963395055.1_02105 CDS open 659-2167 1509_na     502_aa nadB L-aspartate oxidase
2106 CAUJPU010000024.1 GCA_963395055.1_02106 CDS open 2219-3331 1113_na     370_aa nadA Quinolinate synthase A
2107 CAUJPU010000024.1 GCA_963395055.1_02107 CDS open 3533-4471 939_na     312_aa hypothetical protein
2108 CAUJPU010000024.1 GCA_963395055.1_02108 CDS open 4528-5409 882_na     293_aa nadC putative nicotinate-nucleotide pyrophosphorylase [carboxylating]
2109 CAUJPU010000024.1 GCA_963395055.1_02109 CDS open 5628-8390 2763_na     920_aa hypothetical protein
2110 CAUJPU010000024.1 GCA_963395055.1_02110 CDS open 8387-8710 324_na     107_aa hypothetical protein
2111 CAUJPU010000024.1 GCA_963395055.1_02111 CDS open 9056-9319 264_na     87_aa hypothetical protein
2112 CAUJPU010000024.1 GCA_963395055.1_02112 CDS open 9330-9518 189_na     62_aa hypothetical protein
2113 CAUJPU010000025.1 rRNA open 268-1803 16S ribosomal RNA
2114 CAUJPU010000025.1 tRNA open 1909-1985 tRNA-Ile(gat)
2115 CAUJPU010000025.1 tRNA open 1991-2066 tRNA-Ala(tgc)
2116 CAUJPU010000025.1 rRNA open 2417-5305 23S ribosomal RNA
2117 CAUJPU010000025.1 rRNA open 5404-5511 5S ribosomal RNA
2118 CAUJPU010000025.1 GCA_963395055.1_02118 CDS open 5617-5772 156_na     51_aa hypothetical protein
2119 CAUJPU010000025.1 GCA_963395055.1_02119 CDS open 5824-6111 288_na     95_aa hypothetical protein
2120 CAUJPU010000026.1 GCA_963395055.1_02120 CDS open 253-2874 2622_na     873_aa pepN Aminopeptidase N
2121 CAUJPU010000026.1 GCA_963395055.1_02121 CDS open 3030-5486 2457_na     818_aa hypothetical protein
2122 CAUJPU010000027.1 GCA_963395055.1_02122 CDS open 54-290 237_na     78_aa IS5 family transposase ISNme1
2123 CAUJPU010000027.1 GCA_963395055.1_02123 CDS open 259-519 261_na     86_aa hypothetical protein
2124 CAUJPU010000027.1 GCA_963395055.1_02124 CDS open 516-1997 1482_na     493_aa hypothetical protein
2125 CAUJPU010000027.1 GCA_963395055.1_02125 CDS open 2021-2575 555_na     184_aa rfbC dTDP-4-dehydrorhamnose 3%2C5-epimerase
2126 CAUJPU010000027.1 GCA_963395055.1_02126 CDS open 2614-3480 867_na     288_aa rffH Glucose-1-phosphate thymidylyltransferase 2
2127 CAUJPU010000027.1 GCA_963395055.1_02127 CDS open 3553-4620 1068_na     355_aa rffG dTDP-glucose 4%2C6-dehydratase 2
2128 CAUJPU010000028.1 GCA_963395055.1_02128 CDS open 474-1043 570_na     189_aa hypothetical protein
2129 CAUJPU010000028.1 GCA_963395055.1_02129 CDS open 1224-1703 480_na     159_aa hypothetical protein
2130 CAUJPU010000028.1 GCA_963395055.1_02130 CDS open 2304-3839 1536_na     511_aa hypothetical protein
2131 CAUJPU010000029.1 GCA_963395055.1_02131 CDS open 134-754 621_na     206_aa yciO putative protein YciO
2132 CAUJPU010000029.1 GCA_963395055.1_02132 CDS open 971-1975 1005_na     334_aa dusA tRNA-dihydrouridine(2020a) synthase
2133 CAUJPU010000029.1 GCA_963395055.1_02133 CDS open 2214-2873 660_na     219_aa hypothetical protein
2134 CAUJPU010000029.1 GCA_963395055.1_02134 CDS open 2870-3964 1095_na     364_aa hypothetical protein
2135 CAUJPU010000030.1 GCA_963395055.1_02135 CDS open 9-722 714_na     237_aa hypothetical protein
2136 CAUJPU010000030.1 GCA_963395055.1_02136 CDS open 750-1073 324_na     107_aa gdx Guanidinium exporter
2137 CAUJPU010000030.1 GCA_963395055.1_02137 CDS open 1598-2104 507_na     168_aa hypothetical protein
2138 CAUJPU010000030.1 GCA_963395055.1_02138 CDS open 2195-2782 588_na     195_aa hypothetical protein
2139 CAUJPU010000030.1 GCA_963395055.1_02139 CDS open 2874-3161 288_na     95_aa hypothetical protein
2140 CAUJPU010000031.1 GCA_963395055.1_02140 CDS open 20-313 294_na     97_aa hypothetical protein
2141 CAUJPU010000031.1 GCA_963395055.1_02141 CDS open 681-857 177_na     58_aa hypothetical protein
2142 CAUJPU010000031.1 GCA_963395055.1_02142 CDS open 2110-2499 390_na     129_aa hypothetical protein
2143 CAUJPU010000032.1 GCA_963395055.1_02143 CDS open 215-673 459_na     152_aa pyrI Aspartate carbamoyltransferase regulatory chain
2144 CAUJPU010000032.1 GCA_963395055.1_02144 CDS open 684-1604 921_na     306_aa pyrB Aspartate carbamoyltransferase catalytic subunit
2145 CAUJPU010000033.1 GCA_963395055.1_02145 CDS open 127-642 516_na     171_aa hypothetical protein
2146 CAUJPU010000033.1 GCA_963395055.1_02146 CDS open 742-921 180_na     59_aa hypothetical protein
2147 CAUJPU010000034.1 GCA_963395055.1_02147 CDS open 653-1057 405_na     134_aa hypothetical protein
2148 CAUJPU010000035.1 GCA_963395055.1_02148 CDS open 439-984 546_na     181_aa hypothetical protein
2149 CAUJPU010000039.1 GCA_963395055.1_02149 CDS open 384-677 294_na     97_aa hypothetical protein
2150 CAUJPU010000040.1 GCA_963395055.1_02150 CDS open 61-411 351_na     116_aa hypothetical protein
2151 CAUJPU010000042.1 GCA_963395055.1_02151 CDS open 2-409 408_na     135_aa IS3 family transposase ISKpn1