Genome Meta Information: Chlamydia pneumoniae J138 (GCA_000011165.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000011165.1 | ||
| HOMD Taxon-ID | HMT-0733 | ||
| Species Name (in use by HOMD) | Chlamydia pneumoniae | ||
| Organism Name (as deposited) | HMT-733 Chlamydia pneumoniae J138 | ||
| Strain or Isolate | J138 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Chlamydiota;c__Chlamydiia;o__Chlamydiales;f__Chlamydiaceae;g__Chlamydophila; s__Chlamydophila pneumoniae |
||
| Sequencing Technology | |||
| Genome Coverage | |||
| Contigs |
|
||
| Total Sequence Length | 1,226,565 (bp) | ||
| GC Percentage | 40.58 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/011/165/GCA_000011165.1_ASM1116v1 | ||
| CDS | 1051 | ||
| Genes | 1096 | ||
| mRNA | 1096 | ||
| misc RNA | 3 | ||
| rRNA | 3 | ||
| tRNA | 38 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.92 % | ||
| CheckM Completeness | 97.9 % | ||
| CheckM Contamination | 0.27 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1116v1 |
| GenBank Assembly Accession | GCA_000011165.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000011165.1 [NCBI] |
| BioSample | SAMD00061097 [NCBI] |
| BioProject | PRJNA257 [NCBI] |
| Submitter | Yamaguchi/Kyushu U. |
| Submission Date | 2016-09-28T01:02:47.050 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 138677 |
| Isolation Source | |
| Geo Location | |
