Genome Meta Information: Agathobacter rectalis ATCC 33656 (GCA_000020605.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000020605.1 | ||
| HOMD Taxon-ID | HMT-960 | ||
| Species Name (in use by HOMD) | Agathobacter rectalis | ||
| Organism Name (as deposited) | HMT-960 Agathobacter rectalis ATCC 33656 | ||
| Strain or Isolate | ATCC 33656 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Bacillota;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Agathobacter; s__Agathobacter rectalis |
||
| Sequencing Technology | |||
| Genome Coverage | |||
| Contigs |
|
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| Total Sequence Length | 3,449,685 (bp) | ||
| GC Percentage | 41.48 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/020/605/GCA_000020605.1_ASM2060v1 | ||
| CDS | 3270 | ||
| Genes | 3460 | ||
| mRNA | 3460 | ||
| misc RNA | 120 | ||
| rRNA | 10 | ||
| tRNA | 59 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 99.28 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 99.99 % | ||
| CheckM2 Contamination | 0.28 % | ||
| CRISPR-cas | 2 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2060v1 |
| GenBank Assembly Accession | GCA_000020605.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000020605.1 [NCBI] |
| BioSample | SAMN02603082 [NCBI] |
| BioProject | PRJNA29071 [NCBI] |
| Submitter | Center for Genome Sciences, Washington University School of Medicine |
| Submission Date | 2014-01-30T11:19:30.796 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 515619 |
| Isolation Source | |
| Geo Location | |
