Genome Meta Information: Streptococcus mitis SK564 (GCA_000148525.2)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000148525.2 | ||
| HOMD Taxon-ID | HMT-677 | ||
| Species Name (in use by HOMD) | Streptococcus mitis | ||
| Organism Name (as deposited) | HMT-677 Streptococcus mitis SK564 | ||
| Strain or Isolate | SK564 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus mitis_H |
||
| Sequencing Technology | 454 FLX | ||
| Genome Coverage | 29.0x | ||
| Contigs |
|
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| Total Sequence Length | 2,026,898 (bp) | ||
| GC Percentage | 39.73 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/148/525/GCA_000148525.2_ASM14852v1 | ||
| CDS | 1926 | ||
| Genes | 2003 | ||
| mRNA | 2003 | ||
| misc RNA | 44 | ||
| rRNA | 0 | ||
| tRNA | 32 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 93.58 % | ||
| CheckM Completeness | 0 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes (Beta) |
View in Anvi`o:
Streptococcus__mitis__HMT_677
(Interactive)
View SVG Image |
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| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM14852v1 |
| GenBank Assembly Accession | GCA_000148525.2 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000148525.1 [NCBI] |
| BioSample | SAMN00001434 [NCBI] |
| BioProject | PRJNA33355 [NCBI] |
| Submitter | University of Maryland Institute for Genome Sciences |
| Submission Date | 2008-12-23T09:23:55.870 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | AEDU01 |
| NCBI TaxID | 585203 |
| Isolation Source | mouth |
| Geo Location | |
