Genome Meta Information: Faecalibacterium prausnitzii M21/2 (GCA_000154385.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000154385.1 | ||
| HOMD Taxon-ID | HMT-0961 | ||
| Species Name (in use by HOMD) | Faecalibacterium prausnitzii | ||
| Organism Name (as deposited) | HMT-961 Faecalibacterium prausnitzii M21/2 | ||
| Strain or Isolate | M21/2 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Clostridia;o__Oscillospirales;f__Ruminococcaceae;g__Faecalibacterium; s__Faecalibacterium prausnitzii |
||
| Sequencing Technology | |||
| Genome Coverage | |||
| Contigs |
|
||
| Total Sequence Length | 3,127,383 (bp) | ||
| GC Percentage | 56.24 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/154/385/GCA_000154385.1_ASM15438v1 | ||
| CDS | 2887 | ||
| Genes | 3009 | ||
| mRNA | 3009 | ||
| misc RNA | 38 | ||
| rRNA | 17 | ||
| tRNA | 66 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 96.82 % | ||
| CheckM Completeness | 99.38 % | ||
| CheckM Contamination | 1.12 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM15438v1 |
| GenBank Assembly Accession | GCA_000154385.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000154385.1 [NCBI] |
| BioSample | SAMN02299416 [NCBI] |
| BioProject | PRJNA18203 [NCBI] |
| Submitter | Washington University Genome Sequencing Center |
| Submission Date | 2013-08-02T12:07:38.783 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | ABED02 |
| NCBI TaxID | 411485 |
| Isolation Source | missing |
| Geo Location | not determined |
