Genome Meta Information: Alistipes putredinis DSM 17216 (GCA_000154465.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000154465.1 | ||
| HOMD Taxon-ID | HMT-965 | ||
| Species Name (in use by HOMD) | Alistipes putredinis | ||
| Organism Name (as deposited) | HMT-965 Alistipes putredinis DSM 17216 | ||
| Strain or Isolate | DSM 17216 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Rikenellaceae;g__Alistipes; s__Alistipes putredinis |
||
| Sequencing Technology | |||
| Genome Coverage | |||
| Contigs |
|
||
| Total Sequence Length | 2,550,678 (bp) | ||
| GC Percentage | 53.28 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/154/465/GCA_000154465.1_ASM15446v1 | ||
| CDS | 2345 | ||
| Genes | 2420 | ||
| mRNA | 2420 | ||
| misc RNA | 19 | ||
| rRNA | 7 | ||
| tRNA | 48 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.52 % | ||
| CheckM Contamination | 0.96 % | ||
| CheckM2 Completeness | 99.99 % | ||
| CheckM2 Contamination | 0.94 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM15446v1 |
| GenBank Assembly Accession | GCA_000154465.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000154465.1 [NCBI] |
| BioSample | SAMN00000002 [NCBI] |
| BioProject | PRJNA19655 [NCBI] |
| Submitter | Washington University Genome Sequencing Center |
| Submission Date | 2008-04-04T08:44:24.950 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | ABFK02 |
| NCBI TaxID | 445970 |
| Isolation Source | missing |
| Geo Location | not determined |
