Genome Meta Information: Fusobacterium periodonticum 2_1_31 (GCA_000158215.3)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000158215.3 | ||
| HOMD Taxon-ID | HMT-0201 | ||
| Species Name (in use by HOMD) | Fusobacterium periodonticum | ||
| Organism Name (as deposited) | HMT-201 Fusobacterium periodonticum 2_1_31 | ||
| Strain or Isolate | 2_1_31 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Fusobacteriota;c__Fusobacteriia;o__Fusobacteriales;f__Fusobacteriaceae;g__Fusobacterium; s__Fusobacterium periodonticum_D |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 240 | ||
| Contigs |
|
||
| Total Sequence Length | 2,546,312 (bp) | ||
| GC Percentage | 30.12 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/158/215/GCA_000158215.3_Fuso_sp_2_1_31_V3 | ||
| CDS | 2339 | ||
| Genes | 2422 | ||
| mRNA | 2422 | ||
| misc RNA | 21 | ||
| rRNA | 11 | ||
| tRNA | 50 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 92.98 % | ||
| CheckM Completeness | 98.37 % | ||
| CheckM Contamination | 0.03 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 2 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | Fuso_sp_2_1_31_V3 |
| GenBank Assembly Accession | GCA_000158215.3 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000158215.3 [NCBI] |
| BioSample | SAMN02463707 [NCBI] |
| BioProject | PRJNA32473 [NCBI] |
| Submitter | Broad Institute |
| Submission Date | 2013-12-18T11:11:28.960 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | ACDC03 |
| NCBI TaxID | 469599 |
| Isolation Source | missing |
| Geo Location | not determined |
