Genome Meta Information: Fusobacterium gonidiaformans 3_1_5R (GCA_000158235.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000158235.1 | ||
| HOMD Taxon-ID | HMT-0860 | ||
| Species Name (in use by HOMD) | Fusobacterium gonidiaformans | ||
| Organism Name (as deposited) | HMT-860 Fusobacterium gonidiaformans 3_1_5R | ||
| Strain or Isolate | 3_1_5R | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Fusobacteriota;c__Fusobacteriia;o__Fusobacteriales;f__Fusobacteriaceae;g__Fusobacterium_C; s__Fusobacterium_C gonidiaformans |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 37.33 | ||
| Contigs |
|
||
| Total Sequence Length | 1,930,430 (bp) | ||
| GC Percentage | 35.15 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/158/235/GCA_000158235.1_ASM15823v1 | ||
| CDS | 1881 | ||
| Genes | 1942 | ||
| mRNA | 1942 | ||
| misc RNA | 13 | ||
| rRNA | 2 | ||
| tRNA | 45 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.74 % | ||
| CheckM Completeness | 98.89 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 2 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM15823v1 |
| GenBank Assembly Accession | GCA_000158235.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000158235.1 [NCBI] |
| BioSample | SAMN02463709 [NCBI] |
| BioProject | PRJNA32477 [NCBI] |
| Submitter | Broad Institute |
| Submission Date | 2013-12-18T11:11:29.257 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | ACDD01 |
| NCBI TaxID | 469605 |
| Isolation Source | missing |
| Geo Location | not determined |
