Genome Meta Information: Fannyhessea vaginae DSM 15829 (GCA_000159235.2)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000159235.2 | ||
| HOMD Taxon-ID | HMT-0814 | ||
| Species Name (in use by HOMD) | Fannyhessea vaginae | ||
| Organism Name (as deposited) | HMT-814 Fannyhessea vaginae DSM 15829 | ||
| Strain or Isolate | DSM 15829 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Coriobacteriia;o__Coriobacteriales;f__Atopobiaceae;g__Fannyhessea; s__Fannyhessea vaginae |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 35.37 | ||
| Contigs |
|
||
| Total Sequence Length | 1,430,526 (bp) | ||
| GC Percentage | 42.66 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/159/235/GCA_000159235.2_ASM15923v2 | ||
| CDS | 1164 | ||
| Genes | 1222 | ||
| mRNA | 1222 | ||
| misc RNA | 8 | ||
| rRNA | 4 | ||
| tRNA | 45 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 99.02 % | ||
| CheckM Contamination | 0.12 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM15923v2 |
| GenBank Assembly Accession | GCA_000159235.2 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000159235.2 [NCBI] |
| BioSample | SAMN00001474 [NCBI] |
| BioProject | PRJNA31435 [NCBI] |
| Submitter | Baylor College of Medecine |
| Submission Date | 2009-01-08T15:52:03.486 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | ACGK02 |
| NCBI TaxID | 525256 |
| Isolation Source | vagina |
| Geo Location | not determined |
