Genome Meta Information: Veillonella dispar ATCC 17748 (GCA_000160015.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000160015.1 | ||
| HOMD Taxon-ID | HMT-0160 | ||
| Species Name (in use by HOMD) | Veillonella dispar | ||
| Organism Name (as deposited) | HMT-160 Veillonella dispar ATCC 17748 | ||
| Strain or Isolate | ATCC 17748 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Negativicutes;o__Veillonellales;f__Veillonellaceae;g__Veillonella; s__Veillonella dispar |
||
| Sequencing Technology | |||
| Genome Coverage | |||
| Contigs |
|
||
| Total Sequence Length | 2,118,767 (bp) | ||
| GC Percentage | 38.92 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/160/015/GCA_000160015.1_ASM16001v1 | ||
| CDS | 1933 | ||
| Genes | 2017 | ||
| mRNA | 2017 | ||
| misc RNA | 17 | ||
| rRNA | 17 | ||
| tRNA | 49 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 99.95 % | ||
| CheckM Contamination | 0.05 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM16001v1 |
| GenBank Assembly Accession | GCA_000160015.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000160015.1 [NCBI] |
| BioSample | SAMN00008863 [NCBI] |
| BioProject | PRJNA30491 [NCBI] |
| Submitter | Washington University Genome Sequencing Center |
| Submission Date | 2010-02-19T22:00:07.500 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | ACIK02 |
| NCBI TaxID | 546273 |
| Isolation Source | missing |
| Geo Location | not determined |
