Genome Meta Information: Fusobacterium periodonticum ATCC 33693 (GCA_000160475.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000160475.1 | ||
| HOMD Taxon-ID | HMT-0201 | ||
| Species Name (in use by HOMD) | Fusobacterium periodonticum | ||
| Organism Name (as deposited) | HMT-201 Fusobacterium periodonticum ATCC 33693 | ||
| Strain or Isolate | ATCC 33693 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Fusobacteriota;c__Fusobacteriia;o__Fusobacteriales;f__Fusobacteriaceae;g__Fusobacterium; s__Fusobacterium periodonticum |
||
| Sequencing Technology | |||
| Genome Coverage | |||
| Contigs |
|
||
| Total Sequence Length | 2,615,003 (bp) | ||
| GC Percentage | 28.69 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/160/475/GCA_000160475.1_ASM16047v1 | ||
| CDS | 2453 | ||
| Genes | 2528 | ||
| mRNA | 2528 | ||
| misc RNA | 21 | ||
| rRNA | 8 | ||
| tRNA | 45 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 98.88 % | ||
| CheckM Contamination | 0.03 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM16047v1 |
| GenBank Assembly Accession | GCA_000160475.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000160475.1 [NCBI] |
| BioSample | SAMN00008828 [NCBI] |
| BioProject | PRJNA30495 [NCBI] |
| Submitter | Washington University Genome Sequencing Center |
| Submission Date | 2010-02-19T20:10:02.523 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | ACJY01 |
| NCBI TaxID | 546275 |
| Isolation Source | missing |
| Geo Location | not determined |
