Genome Meta Information: Cardiobacterium hominis ATCC 15826 (GCA_000160655.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000160655.1 | ||
| HOMD Taxon-ID | HMT-0633 | ||
| Species Name (in use by HOMD) | Cardiobacterium hominis | ||
| Organism Name (as deposited) | HMT-633 Cardiobacterium hominis ATCC 15826 | ||
| Strain or Isolate | ATCC 15826 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Cardiobacteriales;f__Cardiobacteriaceae;g__Cardiobacterium; s__Cardiobacterium hominis |
||
| Sequencing Technology | |||
| Genome Coverage | |||
| Contigs |
|
||
| Total Sequence Length | 2,642,494 (bp) | ||
| GC Percentage | 60.3 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/160/655/GCA_000160655.1_ASM16065v1 | ||
| CDS | 2392 | ||
| Genes | 2460 | ||
| mRNA | 2460 | ||
| misc RNA | 14 | ||
| rRNA | 3 | ||
| tRNA | 50 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.98 % | ||
| CheckM Completeness | 97.81 % | ||
| CheckM Contamination | 0.88 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM16065v1 |
| GenBank Assembly Accession | GCA_000160655.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000160655.1 [NCBI] |
| BioSample | SAMN00120585 [NCBI] |
| BioProject | PRJNA37269 [NCBI] |
| Submitter | Baylor College of Medicine |
| Submission Date | 2010-11-19T14:41:02.343 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | ACKY01 |
| NCBI TaxID | 638300 |
| Isolation Source | missing |
| Geo Location | not determined |
