Genome Meta Information: Fusobacterium animalis 3_1_33 (GCA_000162355.2)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000162355.2 | ||
| HOMD Taxon-ID | HMT-0420 | ||
| Species Name (in use by HOMD) | Fusobacterium animalis | ||
| Organism Name (as deposited) | HMT-420 Fusobacterium animalis 3_1_33 | ||
| Strain or Isolate | 3_1_33 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Fusobacteriota;c__Fusobacteriia;o__Fusobacteriales;f__Fusobacteriaceae;g__Fusobacterium; s__Fusobacterium animalis |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 136 | ||
| Contigs |
|
||
| Total Sequence Length | 2,302,090 (bp) | ||
| GC Percentage | 27.35 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/162/355/GCA_000162355.2_Fuso_sp_3_1_33_V2 | ||
| CDS | 2097 | ||
| Genes | 2180 | ||
| mRNA | 2180 | ||
| misc RNA | 21 | ||
| rRNA | 14 | ||
| tRNA | 47 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 96.84 % | ||
| CheckM Completeness | 99.84 % | ||
| CheckM Contamination | 0.19 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | Fuso_sp_3_1_33_V2 |
| GenBank Assembly Accession | GCA_000162355.2 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000162355.2 [NCBI] |
| BioSample | SAMN02463746 [NCBI] |
| BioProject | PRJNA38519 [NCBI] |
| Submitter | Broad Institute |
| Submission Date | 2013-12-18T11:11:34.460 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | ACQE02 |
| NCBI TaxID | 469603 |
| Isolation Source | missing |
| Geo Location | not determined |
