Genome Meta Information: Hoylesella sp. HMT-317 F0108 (GCA_000162415.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000162415.1 | ||
| HOMD Taxon-ID | HMT-0317 | ||
| Species Name (in use by HOMD) | Hoylesella sp. HMT-317 | ||
| Organism Name (as deposited) | HMT-317 Hoylesella sp. HMT-317 F0108 | ||
| Strain or Isolate | F0108 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella; s__Prevotella conceptionensis |
||
| Sequencing Technology | |||
| Genome Coverage | |||
| Contigs |
|
||
| Total Sequence Length | 4,099,098 (bp) | ||
| GC Percentage | 48.4 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/162/415/GCA_000162415.1_ASM16241v1 | ||
| CDS | 3318 | ||
| Genes | 3375 | ||
| mRNA | 3375 | ||
| misc RNA | 8 | ||
| rRNA | 3 | ||
| tRNA | 45 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.6 % | ||
| CheckM Contamination | 0.09 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | Ambiguous [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM16241v1 |
| GenBank Assembly Accession | GCA_000162415.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000162415.1 [NCBI] |
| BioSample | SAMN02595329 [NCBI] |
| BioProject | PRJNA38521 [NCBI] |
| Submitter | Broad Institute |
| Submission Date | 2014-01-23T10:15:14.777 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | ACQH01 |
| NCBI TaxID | 575615 |
| Isolation Source | |
| Geo Location | |
