Genome Meta Information: Corynebacterium jeikeium ATCC 43734 (GCA_000163435.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000163435.1 | ||
| HOMD Taxon-ID | HMT-0047 | ||
| Species Name (in use by HOMD) | Corynebacterium jeikeium | ||
| Organism Name (as deposited) | HMT-047 Corynebacterium jeikeium ATCC 43734 | ||
| Strain or Isolate | ATCC 43734 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium; s__Corynebacterium jeikeium |
||
| Sequencing Technology | |||
| Genome Coverage | |||
| Contigs |
|
||
| Total Sequence Length | 2,492,821 (bp) | ||
| GC Percentage | 62.65 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/163/435/GCA_000163435.1_ASM16343v1 | ||
| CDS | 2152 | ||
| Genes | 2213 | ||
| mRNA | 0 | ||
| misc RNA | 6 | ||
| rRNA | 3 | ||
| tRNA | 51 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 98.55 % | ||
| CheckM Contamination | 0.8 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM16343v1 |
| GenBank Assembly Accession | GCA_000163435.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000163435.1 [NCBI] |
| BioSample | SAMN00001506 [NCBI] |
| BioProject | PRJNA31445 [NCBI] |
| Submitter | BCM |
| Submission Date | 2009-01-16T17:09:02.813 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | ACYW01 |
| NCBI TaxID | 525262 |
| Isolation Source | missing |
| Geo Location | not determined |
