Genome Meta Information: Hoylesella loescheii F0295 (GCA_000163495.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000163495.1 | ||
| HOMD Taxon-ID | HMT-0658 | ||
| Species Name (in use by HOMD) | Hoylesella loescheii | ||
| Organism Name (as deposited) | HMT-658 Hoylesella loescheii F0295 | ||
| Strain or Isolate | F0295 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella; s__Prevotella loescheii |
||
| Sequencing Technology | |||
| Genome Coverage | |||
| Contigs |
|
||
| Total Sequence Length | 3,635,499 (bp) | ||
| GC Percentage | 47.69 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/163/495/GCA_000163495.1_ASM16349v1 | ||
| CDS | 2891 | ||
| Genes | 2947 | ||
| mRNA | 2947 | ||
| misc RNA | 8 | ||
| rRNA | 3 | ||
| tRNA | 44 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.04 % | ||
| CheckM Contamination | 0.22 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | Ambiguous [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM16349v1 |
| GenBank Assembly Accession | GCA_000163495.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000163495.1 [NCBI] |
| BioSample | SAMN00216890 [NCBI] |
| BioProject | PRJNA38731 [NCBI] |
| Submitter | Baylor College of Medicine |
| Submission Date | 2011-03-01T16:52:07.243 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | ACZS01 |
| NCBI TaxID | 619693 |
| Isolation Source | missing |
| Geo Location | not determined |
