Genome Meta Information: Veillonella parvula 3_1_44 (GCA_000163715.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000163715.1 | ||
| HOMD Taxon-ID | HMT-0161 | ||
| Species Name (in use by HOMD) | Veillonella parvula | ||
| Organism Name (as deposited) | HMT-161 Veillonella parvula 3_1_44 | ||
| Strain or Isolate | 3_1_44 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Negativicutes;o__Veillonellales;f__Veillonellaceae;g__Veillonella; s__Veillonella parvula_A |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 24.2 | ||
| Contigs |
|
||
| Total Sequence Length | 2,163,458 (bp) | ||
| GC Percentage | 38.84 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/163/715/GCA_000163715.1_ASM16371v1 | ||
| CDS | 1910 | ||
| Genes | 1987 | ||
| mRNA | 1987 | ||
| misc RNA | 21 | ||
| rRNA | 6 | ||
| tRNA | 49 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.85 % | ||
| CheckM Contamination | 0.05 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM16371v1 |
| GenBank Assembly Accession | GCA_000163715.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000163715.1 [NCBI] |
| BioSample | SAMN02463830 [NCBI] |
| BioProject | PRJNA41975 [NCBI] |
| Submitter | Broad Institute |
| Submission Date | 2013-12-18T11:11:44.227 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | ADCV01 |
| NCBI TaxID | 457416 |
| Isolation Source | missing |
| Geo Location | not determined |
