Genome Meta Information: Filifactor alocis ATCC 35896 (GCA_000163895.2)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000163895.2 | ||
| HOMD Taxon-ID | HMT-0539 | ||
| Species Name (in use by HOMD) | Filifactor alocis | ||
| Organism Name (as deposited) | HMT-539 Filifactor alocis ATCC 35896 | ||
| Strain or Isolate | ATCC 35896 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Clostridia;o__Peptostreptococcales;f__Filifactoraceae;g__Filifactor; s__Filifactor alocis |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 47.32 | ||
| Contigs |
|
||
| Total Sequence Length | 1,931,012 (bp) | ||
| GC Percentage | 35.45 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/163/895/GCA_000163895.2_ASM16389v2 | ||
| CDS | 1688 | ||
| Genes | 1779 | ||
| mRNA | 1779 | ||
| misc RNA | 31 | ||
| rRNA | 12 | ||
| tRNA | 47 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.09 % | ||
| CheckM Contamination | 0.91 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 2 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM16389v2 |
| GenBank Assembly Accession | GCA_000163895.2 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000163895.2 [NCBI] |
| BioSample | SAMN02463683 [NCBI] |
| BioProject | PRJNA30485 [NCBI] |
| Submitter | Broad Institute |
| Submission Date | 2013-12-18T11:11:25.773 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 546269 |
| Isolation Source | |
| Geo Location | not determined |
