Genome Meta Information: Fusobacterium vincentii 3_1_27 (GCA_000163915.2)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000163915.2 | ||
| HOMD Taxon-ID | HMT-0200 | ||
| Species Name (in use by HOMD) | Fusobacterium vincentii | ||
| Organism Name (as deposited) | HMT-200 Fusobacterium vincentii 3_1_27 | ||
| Strain or Isolate | 3_1_27 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Fusobacteriota;c__Fusobacteriia;o__Fusobacteriales;f__Fusobacteriaceae;g__Fusobacterium; s__Fusobacterium vincentii |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 17 | ||
| Contigs |
|
||
| Total Sequence Length | 2,190,228 (bp) | ||
| GC Percentage | 27.09 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/163/915/GCA_000163915.2_ASM16391v2 | ||
| CDS | 2028 | ||
| Genes | 2108 | ||
| mRNA | 2108 | ||
| misc RNA | 18 | ||
| rRNA | 15 | ||
| tRNA | 46 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 97.67 % | ||
| CheckM Completeness | 97.58 % | ||
| CheckM Contamination | 0.03 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM16391v2 |
| GenBank Assembly Accession | GCA_000163915.2 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000163915.2 [NCBI] |
| BioSample | SAMN02463816 [NCBI] |
| BioProject | PRJNA41563 [NCBI] |
| Submitter | Broad Institute |
| Submission Date | 2013-12-18T11:11:42.833 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 469602 |
| Isolation Source | |
| Geo Location | not determined |
