Genome Meta Information: Fusobacterium periodonticum 1_1_41FAA (GCA_000163935.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000163935.1 | ||
| HOMD Taxon-ID | HMT-0201 | ||
| Species Name (in use by HOMD) | Fusobacterium periodonticum | ||
| Organism Name (as deposited) | HMT-201 Fusobacterium periodonticum 1_1_41FAA | ||
| Strain or Isolate | 1_1_41FAA | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Fusobacteriota;c__Fusobacteriia;o__Fusobacteriales;f__Fusobacteriaceae;g__Fusobacterium; s__Fusobacterium periodonticum_B |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 36.43 | ||
| Contigs |
|
||
| Total Sequence Length | 2,479,455 (bp) | ||
| GC Percentage | 28.6 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/163/935/GCA_000163935.1_ASM16393v1 | ||
| CDS | 2383 | ||
| Genes | 2461 | ||
| mRNA | 2461 | ||
| misc RNA | 23 | ||
| rRNA | 8 | ||
| tRNA | 46 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 92.97 % | ||
| CheckM Completeness | 99.76 % | ||
| CheckM Contamination | 0.03 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 3 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM16393v1 |
| GenBank Assembly Accession | GCA_000163935.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000163935.1 [NCBI] |
| BioSample | SAMN02463706 [NCBI] |
| BioProject | PRJNA32469 [NCBI] |
| Submitter | Broad Institute |
| Submission Date | 2013-12-18T11:11:28.827 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | ADGG01 |
| NCBI TaxID | 469621 |
| Isolation Source | missing |
| Geo Location | not determined |
