Genome Meta Information: Gemella haemolysans ATCC 10379 (GCA_000173915.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000173915.1 | ||
| HOMD Taxon-ID | HMT-0626 | ||
| Species Name (in use by HOMD) | Gemella haemolysans | ||
| Organism Name (as deposited) | HMT-626 Gemella haemolysans clade-626 ATCC 10379 | ||
| Strain or Isolate | ATCC 10379 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Staphylococcales;f__Gemellaceae;g__Gemella; s__Gemella haemolysans |
||
| Sequencing Technology | |||
| Genome Coverage | |||
| Contigs |
|
||
| Total Sequence Length | 1,916,192 (bp) | ||
| GC Percentage | 30.88 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/173/915/GCA_000173915.1_ASM17391v1 | ||
| CDS | 1688 | ||
| Genes | 1780 | ||
| mRNA | 0 | ||
| misc RNA | 33 | ||
| rRNA | 15 | ||
| tRNA | 43 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.97 % | ||
| CheckM Completeness | 97.81 % | ||
| CheckM Contamination | 1.02 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
2) OpenAnvi`o (Interactive) OpenSVG (Preview) |
||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM17391v1 |
| GenBank Assembly Accession | GCA_000173915.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000173915.1 [NCBI] |
| BioSample | SAMN00000721 [NCBI] |
| BioProject | PRJNA30487 [NCBI] |
| Submitter | Human Microbiome Project |
| Submission Date | 2008-10-03T13:58:01.766 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | ACDZ02 |
| NCBI TaxID | 546270 |
| Isolation Source | missing |
| Geo Location | not determined |
