Genome Meta Information: Rothia mucilaginosa ATCC 25296 (GCA_000175615.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000175615.1 | ||
| HOMD Taxon-ID | HMT-681 | ||
| Species Name (in use by HOMD) | Rothia mucilaginosa | ||
| Organism Name (as deposited) | HMT-681 Rothia mucilaginosa clade-681 ATCC 25296 | ||
| Strain or Isolate | ATCC 25296 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Micrococcaceae;g__Rothia; s__Rothia mucilaginosa |
||
| Sequencing Technology | |||
| Genome Coverage | |||
| Contigs |
|
||
| Total Sequence Length | 2,255,158 (bp) | ||
| GC Percentage | 59.54 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/175/615/GCA_000175615.1_ASM17561v1 | ||
| CDS | 1722 | ||
| Genes | 1793 | ||
| mRNA | 1793 | ||
| misc RNA | 13 | ||
| rRNA | 6 | ||
| tRNA | 51 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.33 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 100 % | ||
| CheckM2 Contamination | 0.05 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP Site] | ||
| Pangenomes (Beta) |
View in Anvi`o:
Rothia__mucilaginosa__HMT_147_681
(Interactive)
View SVG Image |
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| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM17561v1 |
| GenBank Assembly Accession | GCA_000175615.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000175615.1 [NCBI] |
| BioSample | SAMN00001919 [NCBI] |
| BioProject | PRJNA31405 [NCBI] |
| Submitter | J. Craig Venter Institute |
| Submission Date | 2009-03-04T13:30:57.446 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | ACVO01 |
| NCBI TaxID | 553201 |
| Isolation Source | missing |
| Geo Location | not determined |
