Genome Meta Information: Campylobacter showae RM3277 (GCA_000175655.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000175655.1 | ||
| HOMD Taxon-ID | HMT-0763 | ||
| Species Name (in use by HOMD) | Campylobacter showae | ||
| Organism Name (as deposited) | HMT-763 Campylobacter showae RM3277 | ||
| Strain or Isolate | RM3277 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Campylobacteraceae;g__Campylobacter_A; s__Campylobacter_A showae |
||
| Sequencing Technology | |||
| Genome Coverage | |||
| Contigs |
|
||
| Total Sequence Length | 2,072,007 (bp) | ||
| GC Percentage | 45.69 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/175/655/GCA_000175655.1_ASM17565v1 | ||
| CDS | 1992 | ||
| Genes | 2040 | ||
| mRNA | 2040 | ||
| misc RNA | 5 | ||
| rRNA | 2 | ||
| tRNA | 40 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 97.9 % | ||
| CheckM Contamination | 0.33 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM17565v1 |
| GenBank Assembly Accession | GCA_000175655.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000175655.1 [NCBI] |
| BioSample | SAMN00000722 [NCBI] |
| BioProject | PRJNA31019 [NCBI] |
| Submitter | J. Craig Venter Institute |
| Submission Date | 2008-10-03T14:00:01.910 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | ACVQ01 |
| NCBI TaxID | 553219 |
| Isolation Source | missing |
| Geo Location | not determined |
