Genome Meta Information: Campylobacter gracilis RM3268 (GCA_000175875.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000175875.1 | ||
| HOMD Taxon-ID | HMT-0623 | ||
| Species Name (in use by HOMD) | Campylobacter gracilis | ||
| Organism Name (as deposited) | HMT-623 Campylobacter gracilis RM3268 | ||
| Strain or Isolate | RM3268 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Campylobacteraceae;g__Campylobacter_B; s__Campylobacter_B gracilis |
||
| Sequencing Technology | |||
| Genome Coverage | |||
| Contigs |
|
||
| Total Sequence Length | 2,255,573 (bp) | ||
| GC Percentage | 46.62 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/175/875/GCA_000175875.1_ASM17587v1 | ||
| CDS | 2132 | ||
| Genes | 2178 | ||
| mRNA | 2178 | ||
| misc RNA | 4 | ||
| rRNA | 2 | ||
| tRNA | 39 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 94.17 % | ||
| CheckM Contamination | 1.22 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | Ambiguous [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM17587v1 |
| GenBank Assembly Accession | GCA_000175875.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000175875.1 [NCBI] |
| BioSample | SAMN00000715 [NCBI] |
| BioProject | PRJNA31021 [NCBI] |
| Submitter | J. Craig Venter Institute |
| Submission Date | 2008-10-03T13:51:02.377 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | ACYG01 |
| NCBI TaxID | 553220 |
| Isolation Source | missing |
| Geo Location | not determined |
