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Genome Meta Information:
Aerococcus
viridans
ATCC 11563 (GCA_000178435.1)
| HOMD Genome-ID |
GCA_000178435.1
|
| HOMD Taxon-ID |
HMT-312
|
| Species Name (in use by HOMD) |
Aerococcus viridans
|
| Organism Name (as deposited) |
HMT-312 Aerococcus viridans ATCC 11563
|
| Strain or Isolate |
ATCC 11563
|
GTDB (V)
Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Aerococcaceae;g__Aerococcus;
s__Aerococcus viridans |
| Sequencing Technology |
454
|
| Genome Coverage |
37.6x
|
| Contigs |
Number of Contigs: 150
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
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|
|
| Total Sequence Length |
2,005,853 (bp) |
| GC Percentage |
39.45
|
| MAG |
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/178/435/GCA_000178435.1_ASM17843v1
|
| CDS |
1830
|
| Genes |
1914
|
| mRNA |
1914
|
| misc RNA |
37
|
| rRNA |
4
|
| tRNA |
41
|
| tmRNA |
2
|
| ANI (Average Nucluotide Identity) |
99.99 %
|
| CheckM Completeness |
98.9 %
|
| CheckM Contamination |
1.65 %
|
| CheckM2 Completeness |
99.92 %
|
| CheckM2 Contamination |
1.15 %
|
| CRISPR-cas |
No Available
Data |
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
ASM17843v1
|
| GenBank Assembly Accession |
GCA_000178435.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_000178435.1
[NCBI]
|
| BioSample |
SAMN00139312
[NCBI]
|
| BioProject |
PRJNA38729
[NCBI]
|
| Submitter |
Baylor College of Medicine
|
| Submission Date |
2010-12-02T17:05:02.233
|
| Assembly Method |
|
| Assembly Level |
Contig
|
| Sequencing Status |
|
| WGS
Project |
ADNT01
|
| NCBI TaxID |
655812
|
| Isolation Source |
missing
|
| Geo Location |
not determined
|
