Genome Meta Information: Veillonella atypica ACS-134-V-Col7a (GCA_000179755.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000179755.1 | ||
| HOMD Taxon-ID | HMT-0524 | ||
| Species Name (in use by HOMD) | Veillonella atypica | ||
| Organism Name (as deposited) | HMT-524 Veillonella atypica ACS-134-V-Col7a | ||
| Strain or Isolate | ACS-134-V-Col7a | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Negativicutes;o__Veillonellales;f__Veillonellaceae;g__Veillonella; s__Veillonella atypica |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 25 | ||
| Contigs |
|
||
| Total Sequence Length | 2,151,913 (bp) | ||
| GC Percentage | 38.98 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/179/755/GCA_000179755.1_ASM17975v1 | ||
| CDS | 1909 | ||
| Genes | 1981 | ||
| mRNA | 1981 | ||
| misc RNA | 21 | ||
| rRNA | 5 | ||
| tRNA | 45 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 97.4 % | ||
| CheckM Completeness | 98.98 % | ||
| CheckM Contamination | 0.1 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 2 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM17975v1 |
| GenBank Assembly Accession | GCA_000179755.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000179755.1 [NCBI] |
| BioSample | SAMN00100747 [NCBI] |
| BioProject | PRJNA51079 [NCBI] |
| Submitter | J. Craig Venter Institute |
| Submission Date | 2010-08-10T16:49:09.517 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | AEDS01 |
| NCBI TaxID | 866778 |
| Isolation Source | missing |
| Geo Location | not determined |
