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Genome Meta Information:
Actinomyces
oris
K20 (GCA_000180155.1)
| HOMD Genome-ID |
GCA_000180155.1
|
| HOMD Taxon-ID |
HMT-043
|
| Species Name (in use by HOMD) |
Actinomyces oris
|
| Organism Name (as deposited) |
HMT-043 Actinomyces oris clade-043 K20
|
| Strain or Isolate |
K20
|
GTDB (V)
Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Actinomycetaceae;g__Actinomyces;
s__Actinomyces oris_A |
| Sequencing Technology |
|
| Genome Coverage |
|
| Contigs |
Number of Contigs: 771
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
NCBI]
|
|
| Total Sequence Length |
2,872,429 (bp) |
| GC Percentage |
67.8
|
| MAG |
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/180/155/GCA_000180155.1_ASM18015v1
|
| CDS |
2506
|
| Genes |
2575
|
| mRNA |
2575
|
| misc RNA |
13
|
| rRNA |
3
|
| tRNA |
52
|
| tmRNA |
1
|
| ANI (Average Nucluotide Identity) |
94.58 %
|
| CheckM Completeness |
93.28 %
|
| CheckM Contamination |
1.83 %
|
| CheckM2 Completeness |
84.26 %
|
| CheckM2 Contamination |
1.42 %
|
| CRISPR-cas |
1 Contig
[View]
[HOMD FTP]
|
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
2)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
ASM18015v1
|
| GenBank Assembly Accession |
GCA_000180155.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_000180155.1
[NCBI]
|
| BioSample |
SAMD00036544
[NCBI]
|
| BioProject |
PRJDA51265
[NCBI]
|
| Submitter |
Osaka Dental University
|
| Submission Date |
2015-09-25T10:15:38.000
|
| Assembly Method |
|
| Assembly Level |
Contig
|
| Sequencing Status |
|
| WGS
Project |
BABV01
|
| NCBI TaxID |
871541
|
| Isolation Source |
|
| Geo Location |
|
