Genome Meta Information: Veillonella rogosae F0412 (GCA_000183505.2)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000183505.2 | ||
| HOMD Taxon-ID | HMT-0158 | ||
| Species Name (in use by HOMD) | Veillonella rogosae | ||
| Organism Name (as deposited) | HMT-158 Veillonella rogosae F0412 | ||
| Strain or Isolate | F0412 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Negativicutes;o__Veillonellales;f__Veillonellaceae;g__Veillonella; s__Veillonella rogosae |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 18 | ||
| Contigs |
|
||
| Total Sequence Length | 2,176,752 (bp) | ||
| GC Percentage | 38.95 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/183/505/GCA_000183505.2_ASM18350v1 | ||
| CDS | 2028 | ||
| Genes | 2106 | ||
| mRNA | 2106 | ||
| misc RNA | 22 | ||
| rRNA | 9 | ||
| tRNA | 46 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 94.91 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM18350v1 |
| GenBank Assembly Accession | GCA_000183505.2 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000183505.1 [NCBI] |
| BioSample | SAMN00116785 [NCBI] |
| BioProject | PRJNA52053 [NCBI] |
| Submitter | J. Craig Venter Institute |
| Submission Date | 2010-10-27T15:54:04.250 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | AENU01 |
| NCBI TaxID | 879309 |
| Isolation Source | missing |
| Geo Location | not determined |
