Genome Meta Information: Streptococcus agalactiae ATCC 13813 (GCA_000186445.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000186445.1 | ||
| HOMD Taxon-ID | HMT-0537 | ||
| Species Name (in use by HOMD) | Streptococcus agalactiae | ||
| Organism Name (as deposited) | HMT-537 Streptococcus agalactiae ATCC 13813 | ||
| Strain or Isolate | ATCC 13813 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus agalactiae |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 52.97 | ||
| Contigs |
|
||
| Total Sequence Length | 2,287,892 (bp) | ||
| GC Percentage | 40.16 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/186/445/GCA_000186445.1_ASM18644v1 | ||
| CDS | 2114 | ||
| Genes | 2189 | ||
| mRNA | 2189 | ||
| misc RNA | 50 | ||
| rRNA | 3 | ||
| tRNA | 22 | ||
| tmRNA | 0 | ||
| ANI (Average Nucluotide Identity) | 99.98 % | ||
| CheckM Completeness | 98.65 % | ||
| CheckM Contamination | 0.49 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM18644v1 |
| GenBank Assembly Accession | GCA_000186445.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000186445.1 [NCBI] |
| BioSample | SAMN00217013 [NCBI] |
| BioProject | PRJNA53057 [NCBI] |
| Submitter | Baylor College of Medicine |
| Submission Date | 2011-03-03T17:54:07.553 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | AEQQ01 |
| NCBI TaxID | 888745 |
| Isolation Source | oral cavity |
| Geo Location | not determined |
