Genome Meta Information: Streptococcus anginosus 1_2_62CV (GCA_000186545.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000186545.1 | ||
| HOMD Taxon-ID | HMT-0543 | ||
| Species Name (in use by HOMD) | Streptococcus anginosus | ||
| Organism Name (as deposited) | HMT-543 Streptococcus anginosus 1_2_62CV | ||
| Strain or Isolate | 1_2_62CV | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus vaginalis |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 61 | ||
| Contigs |
|
||
| Total Sequence Length | 1,821,055 (bp) | ||
| GC Percentage | 38.99 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/186/545/GCA_000186545.1_Strep_angi_1_2_62CV_V1 | ||
| CDS | 1774 | ||
| Genes | 1872 | ||
| mRNA | 1872 | ||
| misc RNA | 33 | ||
| rRNA | 3 | ||
| tRNA | 61 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 95.67 % | ||
| CheckM Completeness | 99.26 % | ||
| CheckM Contamination | 0.08 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | Strep_angi_1_2_62CV_V1 |
| GenBank Assembly Accession | GCA_000186545.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000186545.1 [NCBI] |
| BioSample | SAMN02463868 [NCBI] |
| BioProject | PRJNA46427 [NCBI] |
| Submitter | Broad Institute |
| Submission Date | 2013-12-18T11:11:48.320 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | ADME01 |
| NCBI TaxID | 742820 |
| Isolation Source | missing |
| Geo Location | not determined |
