Genome Meta Information: Streptococcus vestibularis ATCC 49124 (GCA_000188295.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000188295.1 | ||
| HOMD Taxon-ID | HMT-0021 | ||
| Species Name (in use by HOMD) | Streptococcus vestibularis | ||
| Organism Name (as deposited) | HMT-021 Streptococcus vestibularis ATCC 49124 | ||
| Strain or Isolate | ATCC 49124 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus vestibularis |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 25.1 | ||
| Contigs |
|
||
| Total Sequence Length | 1,872,773 (bp) | ||
| GC Percentage | 40.61 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/188/295/GCA_000188295.1_ASM18829v1 | ||
| CDS | 1794 | ||
| Genes | 1852 | ||
| mRNA | 1852 | ||
| misc RNA | 31 | ||
| rRNA | 3 | ||
| tRNA | 23 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.94 % | ||
| CheckM Completeness | 97.51 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM18829v1 |
| GenBank Assembly Accession | GCA_000188295.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000188295.1 [NCBI] |
| BioSample | SAMN00253297 [NCBI] |
| BioProject | PRJNA53209 [NCBI] |
| Submitter | Baylor College of Medicine |
| Submission Date | 2011-03-26T14:42:06.063 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | AEVI01 |
| NCBI TaxID | 889206 |
| Isolation Source | oral cavity |
| Geo Location | not determined |
