Genome Meta Information: Haemophilus parainfluenzae ATCC 33392 (GCA_000191405.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000191405.1 | ||
| HOMD Taxon-ID | HMT-0718 | ||
| Species Name (in use by HOMD) | Haemophilus parainfluenzae | ||
| Organism Name (as deposited) | HMT-718 Haemophilus parainfluenzae ATCC 33392 | ||
| Strain or Isolate | ATCC 33392 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Pasteurellaceae;g__Haemophilus_D; s__Haemophilus_D parainfluenzae |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 35.37 | ||
| Contigs |
|
||
| Total Sequence Length | 2,124,757 (bp) | ||
| GC Percentage | 39.6 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/191/405/GCA_000191405.1_ASM19140v1 | ||
| CDS | 1971 | ||
| Genes | 2079 | ||
| mRNA | 2079 | ||
| misc RNA | 55 | ||
| rRNA | 4 | ||
| tRNA | 48 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 99.32 % | ||
| CheckM Contamination | 0.32 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | Ambiguous [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM19140v1 |
| GenBank Assembly Accession | GCA_000191405.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000191405.1 [NCBI] |
| BioSample | SAMN00253308 [NCBI] |
| BioProject | PRJNA53197 [NCBI] |
| Submitter | Baylor College of Medicine |
| Submission Date | 2011-03-26T23:58:05.777 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | AEWU01 |
| NCBI TaxID | 888828 |
| Isolation Source | |
| Geo Location | not determined |
