Genome Meta Information: Actinomyces sp. HMT-170 F0386 (GCA_000195595.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000195595.1 | ||
| HOMD Taxon-ID | HMT-170 | ||
| Species Name (in use by HOMD) | Actinomyces sp. HMT-170 | ||
| Organism Name (as deposited) | HMT-170 Actinomyces sp. HMT-170 F0386 | ||
| Strain or Isolate | F0386 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Actinomycetaceae;g__Actinomyces; s__Actinomyces sp000195595 |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 44.8x | ||
| Contigs |
|
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| Total Sequence Length | 3,135,144 (bp) | ||
| GC Percentage | 67.76 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/195/595/GCA_000195595.1_ASM19559v1 | ||
| CDS | 2612 | ||
| Genes | 2684 | ||
| mRNA | 2684 | ||
| misc RNA | 15 | ||
| rRNA | 2 | ||
| tRNA | 53 | ||
| tmRNA | 2 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.76 % | ||
| CheckM Contamination | 0.47 % | ||
| CheckM2 Completeness | 99.96 % | ||
| CheckM2 Contamination | 0.23 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM19559v1 |
| GenBank Assembly Accession | GCA_000195595.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000195595.1 [NCBI] |
| BioSample | SAMN00189093 [NCBI] |
| BioProject | PRJNA48493 [NCBI] |
| Submitter | Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine |
| Submission Date | 2010-12-23T11:17:03.747 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | AFBL01 |
| NCBI TaxID | 762963 |
| Isolation Source | |
| Geo Location | not determined |
