Genome Meta Information: Haemophilus aegyptius F3047 (GCA_000200475.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000200475.1 | ||
| HOMD Taxon-ID | HMT-0535 | ||
| Species Name (in use by HOMD) | Haemophilus aegyptius | ||
| Organism Name (as deposited) | HMT-535 Haemophilus aegyptius F3047 | ||
| Strain or Isolate | F3047 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Pasteurellaceae;g__Haemophilus; s__Haemophilus influenzae |
||
| Sequencing Technology | |||
| Genome Coverage | |||
| Contigs |
|
||
| Total Sequence Length | 2,007,018 (bp) | ||
| GC Percentage | 38.22 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/200/475/GCA_000200475.1_ASM20047v1 | ||
| CDS | 1979 | ||
| Genes | 2100 | ||
| mRNA | 2100 | ||
| misc RNA | 44 | ||
| rRNA | 19 | ||
| tRNA | 57 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 96.99 % | ||
| CheckM Completeness | 98.44 % | ||
| CheckM Contamination | 0.02 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM20047v1 |
| GenBank Assembly Accession | GCA_000200475.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000200475.1 [NCBI] |
| BioSample | SAMEA2272570 [NCBI] |
| BioProject | PRJEA61001 [NCBI] |
| Submitter | Wellcome Trust Sanger insititute |
| Submission Date | 2013-12-20T12:43:39.643 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 935897 |
| Isolation Source | |
| Geo Location | |
