Genome Meta Information: Agathobacter rectalis DSM 17629 (GCA_000209935.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000209935.1 | ||
| HOMD Taxon-ID | HMT-960 | ||
| Species Name (in use by HOMD) | Agathobacter rectalis | ||
| Organism Name (as deposited) | HMT-960 Agathobacter rectalis DSM 17629 | ||
| Strain or Isolate | DSM 17629 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Bacillota;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Agathobacter; s__Agathobacter rectalis |
||
| Sequencing Technology | |||
| Genome Coverage | |||
| Contigs |
|
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| Total Sequence Length | 3,344,951 (bp) | ||
| GC Percentage | 42.92 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/209/935/GCA_000209935.1_ASM20993v1 | ||
| CDS | 3107 | ||
| Genes | 3242 | ||
| mRNA | 3242 | ||
| misc RNA | 88 | ||
| rRNA | 2 | ||
| tRNA | 44 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.28 % | ||
| CheckM Completeness | 99.28 % | ||
| CheckM Contamination | 1.21 % | ||
| CheckM2 Completeness | 99.99 % | ||
| CheckM2 Contamination | 0.19 % | ||
| CRISPR-cas | 2 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM20993v1 |
| GenBank Assembly Accession | GCA_000209935.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000209935.1 [NCBI] |
| BioSample | SAMEA3138356 [NCBI] |
| BioProject | PRJNA39159 [NCBI] |
| Submitter | MetaHIT |
| Submission Date | 2014-11-21T08:58:41.206 |
| Assembly Method | |
| Assembly Level | Chromosome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 657318 |
| Isolation Source | |
| Geo Location | |
