Genome Meta Information: Arthrospira platensis NIES-39 (GCA_000210375.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000210375.1 | ||
| HOMD Taxon-ID | HMT-229 | ||
| Species Name (in use by HOMD) | Arthrospira platensis | ||
| Organism Name (as deposited) | HMT-229 Arthrospira platensis NIES-39 | ||
| Strain or Isolate | NIES-39 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Cyanobacteriota;c__Cyanobacteriia;o__Cyanobacteriales;f__Microcoleaceae;g__Limnospira; s__Limnospira platensis |
||
| Sequencing Technology | |||
| Genome Coverage | |||
| Contigs |
|
||
| Total Sequence Length | 6,788,435 (bp) | ||
| GC Percentage | 45.06 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/210/375/GCA_000210375.1_ASM21037v1 | ||
| CDS | 6302 | ||
| Genes | 6741 | ||
| mRNA | 6741 | ||
| misc RNA | 387 | ||
| rRNA | 4 | ||
| tRNA | 47 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.61 % | ||
| CheckM Completeness | 99.13 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 99.99 % | ||
| CheckM2 Contamination | 0.1 % | ||
| CRISPR-cas | 3 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM21037v1 |
| GenBank Assembly Accession | GCA_000210375.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000210375.1 [NCBI] |
| BioSample | SAMD00060970 [NCBI] |
| BioProject | PRJDA42161 [NCBI] |
| Submitter | National Institute of Technology and Evaluation |
| Submission Date | 2016-09-28T01:01:04.725 |
| Assembly Method | |
| Assembly Level | Chromosome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 696747 |
| Isolation Source | |
| Geo Location | |
