Genome Meta Information: Fretibacterium fastidiosum SGP1 (GCA_000210715.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000210715.1 | ||
| HOMD Taxon-ID | HMT-0363 | ||
| Species Name (in use by HOMD) | Fretibacterium fastidiosum | ||
| Organism Name (as deposited) | HMT-363 Fretibacterium fastidiosum SGP1 | ||
| Strain or Isolate | SGP1 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Synergistota;c__Synergistia;o__Synergistales;f__Aminobacteriaceae;g__Fretibacterium; s__Fretibacterium fastidiosum |
||
| Sequencing Technology | |||
| Genome Coverage | |||
| Contigs |
|
||
| Total Sequence Length | 2,728,333 (bp) | ||
| GC Percentage | 66.68 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/210/715/GCA_000210715.1_ASM21071v1 | ||
| CDS | 2412 | ||
| Genes | 0 | ||
| mRNA | 0 | ||
| misc RNA | 18 | ||
| rRNA | 0 | ||
| tRNA | 43 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.98 % | ||
| CheckM Completeness | 83.86 % | ||
| CheckM Contamination | 2.64 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM21071v1 |
| GenBank Assembly Accession | GCA_000210715.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000210715.1 [NCBI] |
| BioSample | SAMEA3138377 [NCBI] |
| BioProject | PRJNA45959 [NCBI] |
| Submitter | metaHIT |
| Submission Date | 2014-11-21T08:58:42.530 |
| Assembly Method | |
| Assembly Level | Chromosome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 651822 |
| Isolation Source | |
| Geo Location | |
