Genome Meta Information: Haemophilus parainfluenzae T3T1 (GCA_000210895.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000210895.1 | ||
| HOMD Taxon-ID | HMT-0718 | ||
| Species Name (in use by HOMD) | Haemophilus parainfluenzae | ||
| Organism Name (as deposited) | HMT-718 Haemophilus parainfluenzae T3T1 | ||
| Strain or Isolate | T3T1 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Pasteurellaceae;g__Haemophilus_D; s__Haemophilus_D parainfluenzae_A |
||
| Sequencing Technology | |||
| Genome Coverage | |||
| Contigs |
|
||
| Total Sequence Length | 2,086,875 (bp) | ||
| GC Percentage | 39.57 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/210/895/GCA_000210895.1_ASM21089v1 | ||
| CDS | 1971 | ||
| Genes | 2091 | ||
| mRNA | 2091 | ||
| misc RNA | 43 | ||
| rRNA | 19 | ||
| tRNA | 57 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 94.07 % | ||
| CheckM Completeness | 99.58 % | ||
| CheckM Contamination | 0.19 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | Ambiguous [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM21089v1 |
| GenBank Assembly Accession | GCA_000210895.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000210895.1 [NCBI] |
| BioSample | SAMEA3138384 [NCBI] |
| BioProject | PRJNA50411 [NCBI] |
| Submitter | The Wellcome Trust Sanger Institute |
| Submission Date | 2014-11-21T08:58:43.030 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 862965 |
| Isolation Source | |
| Geo Location | |
