Genome Meta Information: Centipeda periodontii DSM 2778 (GCA_000213975.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000213975.1 | ||
| HOMD Taxon-ID | HMT-0726 | ||
| Species Name (in use by HOMD) | Centipeda periodontii | ||
| Organism Name (as deposited) | HMT-726 Centipeda periodontii DSM 2778 | ||
| Strain or Isolate | DSM 2778 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Negativicutes;o__Selenomonadales;f__Selenomonadaceae;g__Centipeda; s__Centipeda periodontii |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 38.34 | ||
| Contigs |
|
||
| Total Sequence Length | 2,761,262 (bp) | ||
| GC Percentage | 56.71 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/213/975/GCA_000213975.1_ASM21397v1 | ||
| CDS | 2495 | ||
| Genes | 2582 | ||
| mRNA | 2582 | ||
| misc RNA | 22 | ||
| rRNA | 6 | ||
| tRNA | 57 | ||
| tmRNA | 2 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.1 % | ||
| CheckM Contamination | 0.2 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 2 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM21397v1 |
| GenBank Assembly Accession | GCA_000213975.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000213975.1 [NCBI] |
| BioSample | SAMN00259653 [NCBI] |
| BioProject | PRJNA53025 [NCBI] |
| Submitter | Baylor College of Medicine |
| Submission Date | 2011-04-14T15:02:07.297 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | AFHQ01 |
| NCBI TaxID | 888060 |
| Isolation Source | |
| Geo Location | not determined |
