Genome Meta Information: Hallella multisaccharivorax DSM 17128 (GCA_000218235.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000218235.1 | ||
| HOMD Taxon-ID | HMT-0794 | ||
| Species Name (in use by HOMD) | Hallella multisaccharivorax | ||
| Organism Name (as deposited) | HMT-794 Hallella multisaccharivorax DSM 17128 | ||
| Strain or Isolate | DSM 17128 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella; s__Prevotella multisaccharivorax |
||
| Sequencing Technology | 454; Illumina | ||
| Genome Coverage | 30 | ||
| Contigs |
|
||
| Total Sequence Length | 3,388,644 (bp) | ||
| GC Percentage | 48.32 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/218/235/GCA_000218235.1_ASM21823v1 | ||
| CDS | 2925 | ||
| Genes | 3040 | ||
| mRNA | 3040 | ||
| misc RNA | 43 | ||
| rRNA | 14 | ||
| tRNA | 58 | ||
| tmRNA | 0 | ||
| ANI (Average Nucluotide Identity) | 99.98 % | ||
| CheckM Completeness | 98.88 % | ||
| CheckM Contamination | 0.45 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM21823v1 |
| GenBank Assembly Accession | GCA_000218235.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000218235.1 [NCBI] |
| BioSample | SAMN02256517 [NCBI] |
| BioProject | PRJNA41513 [NCBI] |
| Submitter | US DOE Joint Genome Institute (JGI-PGF) |
| Submission Date | 2013-07-17T10:56:20.796 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | AFJE01 |
| NCBI TaxID | 688246 |
| Isolation Source | Subgingival plaque, chronic periodontitis; Japan |
| Geo Location | Japan |
