Genome Meta Information: Streptococcus sp. HMT-056 F0418 (GCA_000220065.2)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000220065.2 | ||
| HOMD Taxon-ID | HMT-0056 | ||
| Species Name (in use by HOMD) | Streptococcus sp. HMT-056 | ||
| Organism Name (as deposited) | HMT-056 Streptococcus sp. HMT-056 F0418 | ||
| Strain or Isolate | F0418 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus sp000220065 |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 37 | ||
| Contigs |
|
||
| Total Sequence Length | 1,943,250 (bp) | ||
| GC Percentage | 39.47 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/220/065/GCA_000220065.2_ASM22006v1 | ||
| CDS | 1918 | ||
| Genes | 2058 | ||
| mRNA | 2058 | ||
| misc RNA | 69 | ||
| rRNA | 12 | ||
| tRNA | 58 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 96.46 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM22006v1 |
| GenBank Assembly Accession | GCA_000220065.2 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000220065.1 [NCBI] |
| BioSample | SAMN00115115 [NCBI] |
| BioProject | PRJNA53569 [NCBI] |
| Submitter | J. Craig Venter Institute |
| Submission Date | 2010-10-08T15:22:03.957 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | AFQU01 |
| NCBI TaxID | 904294 |
| Isolation Source | |
| Geo Location | not determined |
