Genome Meta Information: Streptococcus mitis SK1080 (GCA_000220085.2)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000220085.2 | ||
| HOMD Taxon-ID | HMT-677 | ||
| Species Name (in use by HOMD) | Streptococcus mitis | ||
| Organism Name (as deposited) | HMT-677 Streptococcus mitis SK1080 | ||
| Strain or Isolate | SK1080 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus mitis_K |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 21.0x | ||
| Contigs |
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| Total Sequence Length | 1,943,752 (bp) | ||
| GC Percentage | 40.33 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/220/085/GCA_000220085.2_ASM22008v2 | ||
| CDS | 1815 | ||
| Genes | 1962 | ||
| mRNA | 1962 | ||
| misc RNA | 52 | ||
| rRNA | 21 | ||
| tRNA | 73 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 93.52 % | ||
| CheckM Completeness | 0 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes (Beta) |
View in Anvi`o:
Streptococcus__mitis__HMT_677
(Interactive)
View SVG Image |
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| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM22008v2 |
| GenBank Assembly Accession | GCA_000220085.2 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000220085.1 [NCBI] |
| BioSample | SAMN00621705 [NCBI] |
| BioProject | PRJNA66113 [NCBI] |
| Submitter | J. Craig Venter Institute |
| Submission Date | 2011-05-26T16:52:56.230 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | AFQV01 |
| NCBI TaxID | 1008453 |
| Isolation Source | |
| Geo Location | not determined |
