Genome Meta Information: Urinicoccus timonensis F0436 (GCA_000221565.2)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000221565.2 | ||
| HOMD Taxon-ID | HMT-0375 | ||
| Species Name (in use by HOMD) | Urinicoccus timonensis | ||
| Organism Name (as deposited) | HMT-375 Urinicoccus timonensis F0436 | ||
| Strain or Isolate | F0436 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Clostridia;o__Tissierellales;f__Peptoniphilaceae;g__Urinicoccus; s__Urinicoccus timonensis |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 30.21 | ||
| Contigs |
|
||
| Total Sequence Length | 1,950,550 (bp) | ||
| GC Percentage | 41.39 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/221/565/GCA_000221565.2_ASM22156v1 | ||
| CDS | 2153 | ||
| Genes | 2257 | ||
| mRNA | 2257 | ||
| misc RNA | 40 | ||
| rRNA | 9 | ||
| tRNA | 54 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 93.02 % | ||
| CheckM Contamination | 1.01 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM22156v1 |
| GenBank Assembly Accession | GCA_000221565.2 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000221565.1 [NCBI] |
| BioSample | SAMN00116783 [NCBI] |
| BioProject | PRJNA52051 [NCBI] |
| Submitter | J. Craig Venter Institute |
| Submission Date | 2010-10-27T15:53:04.177 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | AFUH01 |
| NCBI TaxID | 879308 |
| Isolation Source | |
| Geo Location | not determined |
