Genome Meta Information: Streptococcus parasanguinis SK236 (GCA_000222725.2)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000222725.2 | ||
| HOMD Taxon-ID | HMT-0411 | ||
| Species Name (in use by HOMD) | Streptococcus parasanguinis | ||
| Organism Name (as deposited) | HMT-411 Streptococcus parasanguinis SK236 | ||
| Strain or Isolate | SK236 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus parasanguinis_C |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 17 | ||
| Contigs |
|
||
| Total Sequence Length | 1,988,691 (bp) | ||
| GC Percentage | 42.12 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/222/725/GCA_000222725.2_ASM22272v2 | ||
| CDS | 1890 | ||
| Genes | 1990 | ||
| mRNA | 1990 | ||
| misc RNA | 32 | ||
| rRNA | 13 | ||
| tRNA | 54 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 94.27 % | ||
| CheckM Completeness | 98.67 % | ||
| CheckM Contamination | 0.25 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM22272v2 |
| GenBank Assembly Accession | GCA_000222725.2 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000222725.1 [NCBI] |
| BioSample | SAMN00621706 [NCBI] |
| BioProject | PRJNA67179 [NCBI] |
| Submitter | J. Craig Venter Institute |
| Submission Date | 2011-05-26T16:54:56.187 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | AFUC01 |
| NCBI TaxID | 1035185 |
| Isolation Source | |
| Geo Location | not determined |
