Genome Meta Information: Streptococcus infantis SK970 (GCA_000223255.2)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000223255.2 | ||
| HOMD Taxon-ID | HMT-0638 | ||
| Species Name (in use by HOMD) | Streptococcus infantis | ||
| Organism Name (as deposited) | HMT-638 Streptococcus infantis clade-638 SK970 | ||
| Strain or Isolate | SK970 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus infantis_G |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 25.33 | ||
| Contigs |
|
||
| Total Sequence Length | 1,945,605 (bp) | ||
| GC Percentage | 39.44 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/223/255/GCA_000223255.2_ASM22325v2 | ||
| CDS | 2133 | ||
| Genes | 2237 | ||
| mRNA | 0 | ||
| misc RNA | 36 | ||
| rRNA | 13 | ||
| tRNA | 54 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 91.99 % | ||
| CheckM Completeness | 78.19 % | ||
| CheckM Contamination | 0.89 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
2) OpenAnvi`o (Interactive) OpenSVG (Preview) |
||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM22325v2 |
| GenBank Assembly Accession | GCA_000223255.2 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000223255.1 [NCBI] |
| BioSample | SAMN00621709 [NCBI] |
| BioProject | PRJNA67191 [NCBI] |
| Submitter | J. Craig Venter Institute |
| Submission Date | 2011-05-26T16:55:11.167 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | AFUT01 |
| NCBI TaxID | 1035189 |
| Isolation Source | |
| Geo Location | not determined |
